Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.63□□□□□ -1.35
NCK1P16333 AC068522.1-201ENST00000482895 345 ntBASIC6.63□□□□□ -1.35
NCK1P16333 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.63□□□□□ -1.35
NCK1P16333 AC006070.1-201ENST00000508151 193 ntBASIC6.63□□□□□ -1.35
NCK1P16333 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.63□□□□□ -1.35
NCK1P16333 OR9L1P-201ENST00000529493 933 ntBASIC6.63□□□□□ -1.35
NCK1P16333 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.63□□□□□ -1.35
NCK1P16333 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NCK1P16333 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NCK1P16333 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.63□□□□□ -1.35
NCK1P16333 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.63□□□□□ -1.35
NCK1P16333 OR4N3P-201ENST00000559395 818 ntBASIC6.63□□□□□ -1.35
NCK1P16333 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.63□□□□□ -1.35
NCK1P16333 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.63□□□□□ -1.35
NCK1P16333 MIR4266-201ENST00000583300 55 ntBASIC6.63□□□□□ -1.35
NCK1P16333 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC6.63□□□□□ -1.35
NCK1P16333 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC6.63□□□□□ -1.35
NCK1P16333 BX005195.1-201ENST00000618097 1198 ntBASIC6.63□□□□□ -1.35
NCK1P16333 AC135068.4-201ENST00000622949 925 ntBASIC6.63□□□□□ -1.35
NCK1P16333 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.63□□□□□ -1.35
NCK1P16333 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NCK1P16333 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.63□□□□□ -1.35
NCK1P16333 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NCK1P16333 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NCK1P16333 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NCK1P16333 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
NCK1P16333 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.62□□□□□ -1.35
NCK1P16333 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
NCK1P16333 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NCK1P16333 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NCK1P16333 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NCK1P16333 CREM-218ENST00000460270 1416 ntTSL 2 BASIC6.62□□□□□ -1.35
NCK1P16333 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
NCK1P16333 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NCK1P16333 SNORA73B-201ENST00000363217 204 ntBASIC6.62□□□□□ -1.35
NCK1P16333 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NCK1P16333 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.62□□□□□ -1.35
NCK1P16333 AC113608.1-201ENST00000398740 305 ntBASIC6.62□□□□□ -1.35
NCK1P16333 AL390039.1-201ENST00000399148 611 ntBASIC6.62□□□□□ -1.35
NCK1P16333 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC6.62□□□□□ -1.35
NCK1P16333 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC6.62□□□□□ -1.35
NCK1P16333 RN7SL368P-201ENST00000473384 277 ntBASIC6.62□□□□□ -1.35
NCK1P16333 RPL23AP8-201ENST00000479812 475 ntBASIC6.62□□□□□ -1.35
NCK1P16333 OR7E163P-201ENST00000505943 894 ntBASIC6.62□□□□□ -1.35
NCK1P16333 AC026700.1-201ENST00000512074 544 ntBASIC6.62□□□□□ -1.35
NCK1P16333 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC6.62□□□□□ -1.35
NCK1P16333 GLYATL1P4-201ENST00000529326 906 ntBASIC6.62□□□□□ -1.35
NCK1P16333 OR7E2P-201ENST00000533071 889 ntBASIC6.62□□□□□ -1.35
NCK1P16333 AC025252.2-201ENST00000537470 502 ntBASIC6.62□□□□□ -1.35
NCK1P16333 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
NCK1P16333 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.62□□□□□ -1.35
NCK1P16333 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.62□□□□□ -1.35
NCK1P16333 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.62□□□□□ -1.35
NCK1P16333 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.62□□□□□ -1.35
NCK1P16333 SNORA70D-201ENST00000578836 135 ntBASIC6.62□□□□□ -1.35
NCK1P16333 RN7SL667P-201ENST00000582817 298 ntBASIC6.62□□□□□ -1.35
NCK1P16333 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.62□□□□□ -1.35
NCK1P16333 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.62□□□□□ -1.35
NCK1P16333 AC111186.1-201ENST00000604684 130 ntBASIC6.62□□□□□ -1.35
NCK1P16333 MIR6872-201ENST00000612981 62 ntBASIC6.62□□□□□ -1.35
NCK1P16333 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.62□□□□□ -1.35
NCK1P16333 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC6.62□□□□□ -1.35
NCK1P16333 AC131009.3-201ENST00000621809 287 ntBASIC6.62□□□□□ -1.35
NCK1P16333 AC073862.4-201ENST00000622982 854 ntBASIC6.62□□□□□ -1.35
NCK1P16333 AC110769.3-201ENST00000624567 1173 ntBASIC6.62□□□□□ -1.35
NCK1P16333 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
NCK1P16333 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
NCK1P16333 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.62□□□□□ -1.35
NCK1P16333 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NCK1P16333 EPS15P1-202ENST00000459691 2071 ntBASIC6.62□□□□□ -1.35
NCK1P16333 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NCK1P16333 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NCK1P16333 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NCK1P16333 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NCK1P16333 OLMALINC-203ENST00000641087 3779 ntBASIC6.62□□□□□ -1.35
NCK1P16333 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NCK1P16333 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NCK1P16333 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NCK1P16333 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NCK1P16333 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NCK1P16333 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NCK1P16333 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
NCK1P16333 AL136298.2-201ENST00000556497 1570 ntBASIC6.61□□□□□ -1.35
NCK1P16333 AC022905.1-201ENST00000503430 3048 ntBASIC6.61□□□□□ -1.35
NCK1P16333 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NCK1P16333 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NCK1P16333 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NCK1P16333 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
NCK1P16333 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
NCK1P16333 FO082842.1-201ENST00000423552 1370 ntBASIC6.61□□□□□ -1.35
NCK1P16333 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NCK1P16333 AC083806.2-201ENST00000617795 2685 ntBASIC6.61□□□□□ -1.35
NCK1P16333 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.61□□□□□ -1.35
NCK1P16333 NEK2P4-201ENST00000425793 1329 ntBASIC6.61□□□□□ -1.35
NCK1P16333 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NCK1P16333 AL512310.3-201ENST00000547023 1335 ntBASIC6.61□□□□□ -1.35
NCK1P16333 BRD7P1-201ENST00000557705 1915 ntBASIC6.61□□□□□ -1.35
NCK1P16333 RN7SKP211-201ENST00000363328 315 ntBASIC6.61□□□□□ -1.35
NCK1P16333 RNA5SP472-201ENST00000363868 119 ntBASIC6.61□□□□□ -1.35
NCK1P16333 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms