Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC135068.4-201ENST00000622949 925 ntBASIC7.52□□□□□ -1.21
APOEP02649 AC130448.2-201ENST00000624082 374 ntBASIC7.52□□□□□ -1.21
APOEP02649 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.52□□□□□ -1.21
APOEP02649 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
APOEP02649 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
APOEP02649 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
APOEP02649 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
APOEP02649 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
APOEP02649 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
APOEP02649 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
APOEP02649 MFSD8-256ENST00000641949 1640 ntBASIC7.52□□□□□ -1.21
APOEP02649 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
APOEP02649 CTAGE11P-201ENST00000451540 2353 ntBASIC7.52□□□□□ -1.21
APOEP02649 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.52□□□□□ -1.21
APOEP02649 QRSL1P3-201ENST00000552666 1316 ntBASIC7.52□□□□□ -1.21
APOEP02649 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
APOEP02649 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 OR52B5P-204ENST00000641744 3467 ntBASIC7.51□□□□□ -1.21
APOEP02649 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.51□□□□□ -1.21
APOEP02649 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.51□□□□□ -1.21
APOEP02649 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
APOEP02649 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.51□□□□□ -1.21
APOEP02649 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
APOEP02649 RN7SKP117-201ENST00000410175 264 ntBASIC7.51□□□□□ -1.21
APOEP02649 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC7.51□□□□□ -1.21
APOEP02649 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC7.51□□□□□ -1.21
APOEP02649 BX119917.1-201ENST00000432517 502 ntBASIC7.51□□□□□ -1.21
APOEP02649 AC239800.1-201ENST00000442049 719 ntBASIC7.51□□□□□ -1.21
APOEP02649 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.51□□□□□ -1.21
APOEP02649 RPL12P7-201ENST00000493832 494 ntBASIC7.51□□□□□ -1.21
APOEP02649 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.51□□□□□ -1.21
APOEP02649 AC055733.3-201ENST00000505214 523 ntBASIC7.51□□□□□ -1.21
APOEP02649 OSTC-204ENST00000512478 663 ntTSL 5 BASIC7.51□□□□□ -1.21
APOEP02649 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.51□□□□□ -1.21
APOEP02649 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.51□□□□□ -1.21
APOEP02649 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.51□□□□□ -1.21
APOEP02649 NDUFA3P2-201ENST00000531434 232 ntBASIC7.51□□□□□ -1.21
APOEP02649 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.51□□□□□ -1.21
APOEP02649 AC092368.2-201ENST00000565911 600 ntBASIC7.51□□□□□ -1.21
APOEP02649 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.51□□□□□ -1.21
APOEP02649 RN7SL689P-201ENST00000577215 297 ntBASIC7.51□□□□□ -1.21
APOEP02649 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.51□□□□□ -1.21
APOEP02649 RN7SL667P-201ENST00000582817 298 ntBASIC7.51□□□□□ -1.21
APOEP02649 AC113361.1-201ENST00000606683 543 ntBASIC7.51□□□□□ -1.21
APOEP02649 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.51□□□□□ -1.21
APOEP02649 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
APOEP02649 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
APOEP02649 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
APOEP02649 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
APOEP02649 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
APOEP02649 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
APOEP02649 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.5□□□□□ -1.21
APOEP02649 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.5□□□□□ -1.21
APOEP02649 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
APOEP02649 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
APOEP02649 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
APOEP02649 AC092111.1-201ENST00000618256 3358 ntBASIC7.5□□□□□ -1.21
APOEP02649 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
APOEP02649 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
APOEP02649 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
APOEP02649 RNA5SP218-201ENST00000363188 109 ntBASIC7.5□□□□□ -1.21
APOEP02649 RNU4-81P-201ENST00000363561 144 ntBASIC7.5□□□□□ -1.21
APOEP02649 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.5□□□□□ -1.21
APOEP02649 RPS3AP5-201ENST00000389400 821 ntBASIC7.5□□□□□ -1.21
APOEP02649 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
APOEP02649 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.5□□□□□ -1.21
APOEP02649 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC7.5□□□□□ -1.21
APOEP02649 AC104698.1-201ENST00000435671 276 ntBASIC7.5□□□□□ -1.21
APOEP02649 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.5□□□□□ -1.21
APOEP02649 CYCSP44-201ENST00000448560 313 ntBASIC7.5□□□□□ -1.21
APOEP02649 PSPC1P2-201ENST00000455130 225 ntBASIC7.5□□□□□ -1.21
APOEP02649 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.5□□□□□ -1.21
APOEP02649 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.5□□□□□ -1.21
APOEP02649 AC117395.2-201ENST00000463122 1128 ntBASIC7.5□□□□□ -1.21
APOEP02649 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.5□□□□□ -1.21
APOEP02649 RN7SL392P-201ENST00000473024 299 ntBASIC7.5□□□□□ -1.21
APOEP02649 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.5□□□□□ -1.21
APOEP02649 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.5□□□□□ -1.21
APOEP02649 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.5□□□□□ -1.21
APOEP02649 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.5□□□□□ -1.21
APOEP02649 AC126177.6-201ENST00000550420 1009 ntBASIC7.5□□□□□ -1.21
APOEP02649 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.5□□□□□ -1.21
APOEP02649 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.5□□□□□ -1.21
APOEP02649 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms