Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RNA5SP79-201ENST00000365193 109 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC245047.6-201ENST00000445444 617 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 CDC42P2-201ENST00000448566 569 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 RPL10P6-201ENST00000457497 318 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC109454.1-201ENST00000471205 498 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 RN7SL797P-201ENST00000486314 297 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC063923.2-201ENST00000562158 928 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 APOC2-204ENST00000591597 447 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC010719.1-201ENST00000602992 747 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 CUX2P1-201ENST00000606426 298 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AL121809.2-201ENST00000613169 341 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC068205.4-201ENST00000637880 804 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 EEF1A1P2-201ENST00000553854 1447 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC009779.8-201ENST00000641684 4384 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 RPL10P16-201ENST00000325000 645 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 RN7SKP36-201ENST00000363997 312 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 RN7SKP107-201ENST00000364157 290 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AL021939.1-201ENST00000441868 886 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 RPL24P8-201ENST00000446071 474 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AL135929.1-201ENST00000449287 552 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 RN7SL414P-201ENST00000469545 294 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC117395.1-201ENST00000487390 403 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 PGAM4P2-201ENST00000512491 721 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC008677.3-201ENST00000519146 666 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 EGLN3P1-201ENST00000541727 720 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC090115.2-201ENST00000548060 883 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AL109628.1-201ENST00000556877 366 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 OR7A11P-201ENST00000597719 953 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC022239.4-201ENST00000602626 504 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC129492.5-201ENST00000603489 315 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC114810.1-201ENST00000607415 473 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC063962.1-201ENST00000608199 521 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB1P01920 AC026951.2-201ENST00000613847 241 ntBASIC6.07□□□□□ -1.44
HLA-DQB1P01920 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms