Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SCN2BO60939 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SCN2BO60939 RPL12P1-201ENST00000374520 498 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 MIR640-201ENST00000385086 96 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 VN1R66P-201ENST00000412929 916 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 OR7E117P-201ENST00000422682 1112 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.74□□□□□ -1.33
SCN2BO60939 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.74□□□□□ -1.33
SCN2BO60939 RN7SL259P-201ENST00000478499 253 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 AC095057.1-201ENST00000507583 168 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 AC068631.3-201ENST00000538831 225 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SCN2BO60939 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.74□□□□□ -1.33
SCN2BO60939 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.74□□□□□ -1.33
SCN2BO60939 AC133569.1-201ENST00000564327 373 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 AC005070.1-201ENST00000603744 365 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 AC007262.1-201ENST00000604099 321 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN2BO60939 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 DDX43P1-201ENST00000510713 1763 ntBASIC6.74□□□□□ -1.33
SCN2BO60939 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SCN2BO60939 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN2BO60939 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SCN2BO60939 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 RPL10P16-201ENST00000325000 645 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.73□□□□□ -1.33
SCN2BO60939 RNA5SP396-201ENST00000364834 120 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 FAM204BP-201ENST00000369171 701 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SCN2BO60939 PSMC1P2-201ENST00000423961 1204 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 NPM1P30-201ENST00000425092 828 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 PRPS1P2-201ENST00000430496 937 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN2BO60939 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.73□□□□□ -1.33
SCN2BO60939 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 AL591379.2-201ENST00000450223 397 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 RPSAP7-201ENST00000456871 885 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 SNORA81.1-201ENST00000458922 177 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 RN7SL213P-201ENST00000463482 317 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 RPL7P17-201ENST00000470927 724 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 RN7SL688P-201ENST00000471754 275 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 RPS14P8-201ENST00000478778 369 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 AP005202.1-201ENST00000489915 867 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN2BO60939 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN2BO60939 AP006437.1-202ENST00000530327 933 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.73□□□□□ -1.33
SCN2BO60939 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.73□□□□□ -1.33
SCN2BO60939 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN2BO60939 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN2BO60939 AP001120.4-201ENST00000590231 108 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.73□□□□□ -1.33
SCN2BO60939 AC104184.1-201ENST00000607513 721 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SCN2BO60939 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN2BO60939 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
SCN2BO60939 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN2BO60939 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
SCN2BO60939 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SCN2BO60939 AC106872.6-201ENST00000514228 1346 ntBASIC6.73□□□□□ -1.33
SCN2BO60939 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN2BO60939 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SCN2BO60939 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN2BO60939 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SCN2BO60939 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms