Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PdfS4R2K0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Gm26571-201ENSMUST00000181399 666 ntBASIC13.26□□□□□ -0.29
PdfS4R2K0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.26□□□□□ -0.29
PdfS4R2K0 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.26□□□□□ -0.29
PdfS4R2K0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.26□□□□□ -0.29
PdfS4R2K0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.26□□□□□ -0.29
PdfS4R2K0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PdfS4R2K0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.25□□□□□ -0.29
PdfS4R2K0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Tgds-204ENSMUST00000228543 1594 ntBASIC13.25□□□□□ -0.29
PdfS4R2K0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.25□□□□□ -0.29
PdfS4R2K0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.25□□□□□ -0.29
PdfS4R2K0 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.25□□□□□ -0.29
PdfS4R2K0 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.25□□□□□ -0.29
PdfS4R2K0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
PdfS4R2K0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.25□□□□□ -0.29
PdfS4R2K0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
PdfS4R2K0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
PdfS4R2K0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PdfS4R2K0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.24□□□□□ -0.29
PdfS4R2K0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PdfS4R2K0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.24□□□□□ -0.29
PdfS4R2K0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Gm12933-201ENSMUST00000120203 872 ntBASIC13.24□□□□□ -0.29
PdfS4R2K0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PdfS4R2K0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PdfS4R2K0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Reep4-203ENSMUST00000226563 1444 ntBASIC13.23□□□□□ -0.29
PdfS4R2K0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.23□□□□□ -0.29
PdfS4R2K0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
PdfS4R2K0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.23□□□□□ -0.29
PdfS4R2K0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.23□□□□□ -0.29
PdfS4R2K0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PdfS4R2K0 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.23□□□□□ -0.29
PdfS4R2K0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.22□□□□□ -0.29
PdfS4R2K0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms