Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 DUSP5P2-201ENST00000426873 1033 ntBASIC20.34■□□□□ 0.85
UBP1Q9NZI7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 AL138781.1-201ENST00000566567 1274 ntBASIC20.34■□□□□ 0.85
UBP1Q9NZI7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 AL109923.1-201ENST00000618799 583 ntBASIC20.34■□□□□ 0.85
UBP1Q9NZI7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBP1Q9NZI7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 AC098934.4-201ENST00000564127 592 ntBASIC20.33■□□□□ 0.85
UBP1Q9NZI7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.33■□□□□ 0.85
UBP1Q9NZI7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBP1Q9NZI7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBP1Q9NZI7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBP1Q9NZI7 KRT8P17-201ENST00000453110 1448 ntBASIC20.33■□□□□ 0.84
UBP1Q9NZI7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.33■□□□□ 0.84
UBP1Q9NZI7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBP1Q9NZI7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.33■□□□□ 0.84
UBP1Q9NZI7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBP1Q9NZI7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.32■□□□□ 0.84
UBP1Q9NZI7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
UBP1Q9NZI7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBP1Q9NZI7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms