Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 KRT16P6-202ENST00000425692 1426 ntBASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRDM9Q9NQV7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 TSPY20P-201ENST00000450910 630 ntBASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 FAM201B-201ENST00000458407 597 ntBASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 AC026366.1-201ENST00000488803 879 ntBASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 UNC93B4-201ENST00000505679 747 ntBASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 AP003097.1-201ENST00000530657 1135 ntBASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.86■□□□□ 0.61
PRDM9Q9NQV7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 ESRRAP1-201ENST00000400596 1257 ntBASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 POU5F1P3-201ENST00000428824 1078 ntBASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 SOX15-203ENST00000570788 1093 ntBASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRDM9Q9NQV7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms