Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CASD1Q96PB1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CASD1Q96PB1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CASD1Q96PB1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.42■■□□□ 1.02
CASD1Q96PB1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.42■■□□□ 1.02
CASD1Q96PB1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CASD1Q96PB1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.42■■□□□ 1.02
CASD1Q96PB1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CASD1Q96PB1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.42■■□□□ 1.02
CASD1Q96PB1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CASD1Q96PB1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.42■■□□□ 1.02
CASD1Q96PB1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CASD1Q96PB1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CASD1Q96PB1 MIR6786-201ENST00000616843 113 ntBASIC21.42■■□□□ 1.02
CASD1Q96PB1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.41■■□□□ 1.02
CASD1Q96PB1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CASD1Q96PB1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CASD1Q96PB1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CASD1Q96PB1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CASD1Q96PB1 KRT16P1-201ENST00000399124 1418 ntBASIC21.41■■□□□ 1.02
CASD1Q96PB1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CASD1Q96PB1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CASD1Q96PB1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.41■■□□□ 1.02
CASD1Q96PB1 MIR1238-201ENST00000408483 83 ntBASIC21.41■■□□□ 1.02
CASD1Q96PB1 TMPOP1-202ENST00000424642 1267 ntBASIC21.41■■□□□ 1.02
CASD1Q96PB1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.41■■□□□ 1.02
CASD1Q96PB1 RN7SL850P-201ENST00000579959 291 ntBASIC21.41■■□□□ 1.02
CASD1Q96PB1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.41■■□□□ 1.02
CASD1Q96PB1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CASD1Q96PB1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.41■■□□□ 1.02
CASD1Q96PB1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CASD1Q96PB1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.41■■□□□ 1.02
CASD1Q96PB1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CASD1Q96PB1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 DPP3P2-201ENST00000416030 1696 ntBASIC21.4■■□□□ 1.02
CASD1Q96PB1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CASD1Q96PB1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CASD1Q96PB1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CASD1Q96PB1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.39■■□□□ 1.02
CASD1Q96PB1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CASD1Q96PB1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CASD1Q96PB1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CASD1Q96PB1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CASD1Q96PB1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 AC006128.1-201ENST00000624704 1661 ntBASIC21.39■■□□□ 1.01
CASD1Q96PB1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CASD1Q96PB1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CASD1Q96PB1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.38■■□□□ 1.01
CASD1Q96PB1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CASD1Q96PB1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CASD1Q96PB1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.38■■□□□ 1.01
CASD1Q96PB1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CASD1Q96PB1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.38■■□□□ 1.01
CASD1Q96PB1 AL390955.1-201ENST00000428694 934 ntBASIC21.38■■□□□ 1.01
CASD1Q96PB1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CASD1Q96PB1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CASD1Q96PB1 AP006587.1-201ENST00000534129 1502 ntBASIC21.38■■□□□ 1.01
CASD1Q96PB1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.38■■□□□ 1.01
CASD1Q96PB1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CASD1Q96PB1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CASD1Q96PB1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.38■■□□□ 1.01
CASD1Q96PB1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CASD1Q96PB1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CASD1Q96PB1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CASD1Q96PB1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms