Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 UBE2DNL-204ENST00000602536 740 ntBASIC20.53■□□□□ 0.88
C9orf72Q96LT7 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.52■□□□□ 0.88
C9orf72Q96LT7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.52■□□□□ 0.88
C9orf72Q96LT7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
C9orf72Q96LT7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
C9orf72Q96LT7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
C9orf72Q96LT7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 BX119927.1-201ENST00000636596 1552 ntBASIC20.51■□□□□ 0.87
C9orf72Q96LT7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 CROCCP5-201ENST00000436658 830 ntBASIC20.51■□□□□ 0.87
C9orf72Q96LT7 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.51■□□□□ 0.87
C9orf72Q96LT7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C9orf72Q96LT7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 TMEM179-206ENST00000616017 1645 ntBASIC20.5■□□□□ 0.87
C9orf72Q96LT7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 AC006970.2-201ENST00000450065 779 ntBASIC20.5■□□□□ 0.87
C9orf72Q96LT7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C9orf72Q96LT7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 AC007322.3-201ENST00000426526 701 ntBASIC20.49■□□□□ 0.87
C9orf72Q96LT7 MYCNOS-205ENST00000641950 531 ntBASIC20.49■□□□□ 0.87
C9orf72Q96LT7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C9orf72Q96LT7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 RBM17P2-201ENST00000616397 1405 ntBASIC20.48■□□□□ 0.87
C9orf72Q96LT7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.48■□□□□ 0.87
C9orf72Q96LT7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms