Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTCD2Q8WV60 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 PTBP1P-201ENST00000554374 1601 ntBASIC20.21■□□□□ 0.83
PTCD2Q8WV60 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCD2Q8WV60 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.2■□□□□ 0.82
PTCD2Q8WV60 AC120057.1-201ENST00000483947 663 ntBASIC20.2■□□□□ 0.82
PTCD2Q8WV60 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PTCD2Q8WV60 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCD2Q8WV60 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.19■□□□□ 0.82
PTCD2Q8WV60 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.19■□□□□ 0.82
PTCD2Q8WV60 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCD2Q8WV60 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTCD2Q8WV60 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.19■□□□□ 0.82
PTCD2Q8WV60 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCD2Q8WV60 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCD2Q8WV60 AL589935.2-201ENST00000616471 1231 ntBASIC20.19■□□□□ 0.82
PTCD2Q8WV60 AL589743.5-201ENST00000616611 1050 ntBASIC20.19■□□□□ 0.82
PTCD2Q8WV60 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.19■□□□□ 0.82
PTCD2Q8WV60 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCD2Q8WV60 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 TMEM179-206ENST00000616017 1645 ntBASIC20.17■□□□□ 0.82
PTCD2Q8WV60 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms