Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 AC023632.3-201ENST00000521633 145 ntBASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 CD99P1-205ENST00000527459 561 ntBASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH19Q8TAB3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 TMEM179-206ENST00000616017 1645 ntBASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 AC092118.2-201ENST00000613495 667 ntBASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH19Q8TAB3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 HLA-G-202ENST00000376815 851 ntBASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 HLA-G-203ENST00000376818 1127 ntBASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 DUSP5P2-201ENST00000426873 1033 ntBASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 KRT16P6-202ENST00000425692 1426 ntBASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH19Q8TAB3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms