Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 LETM1P2-201ENST00000597330 2178 ntBASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.79■□□□□ 0.44
NANOGP1Q8N7R0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 FAM21FP-204ENST00000608637 956 ntBASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NANOGP1Q8N7R0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 AC135279.3-201ENST00000610945 1311 ntBASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 AC027682.1-201ENST00000562846 899 ntBASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NANOGP1Q8N7R0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 AC005082.1-201ENST00000413042 2259 ntBASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NANOGP1Q8N7R0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 AL136116.3-201ENST00000402907 1138 ntBASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 AC091799.1-201ENST00000422823 811 ntBASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 AC007322.3-201ENST00000426526 701 ntBASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 AC079140.4-201ENST00000507448 529 ntBASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.76■□□□□ 0.43
NANOGP1Q8N7R0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms