Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 AC091874.3-201ENST00000512672 1195 ntBASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 AL691432.2-201ENST00000607222 2038 ntBASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC65Q8IXS2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CCDC65Q8IXS2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CCDC65Q8IXS2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 AL138781.1-201ENST00000566567 1274 ntBASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 AC104771.1-201ENST00000603335 964 ntBASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CCDC65Q8IXS2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.14■■□□□ 1.14
CCDC65Q8IXS2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
CCDC65Q8IXS2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC65Q8IXS2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC65Q8IXS2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms