Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 AL358472.4-201ENST00000633140 710 ntBASIC16.75■□□□□ 0.27
VPS13CQ709C8 AC011484.1-201ENST00000377652 1995 ntBASIC16.75■□□□□ 0.27
VPS13CQ709C8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS13CQ709C8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS13CQ709C8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS13CQ709C8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS13CQ709C8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.75■□□□□ 0.27
VPS13CQ709C8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS13CQ709C8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS13CQ709C8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS13CQ709C8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS13CQ709C8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
VPS13CQ709C8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VPS13CQ709C8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS13CQ709C8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.74■□□□□ 0.27
VPS13CQ709C8 FAM87A-204ENST00000613235 858 ntBASIC16.74■□□□□ 0.27
VPS13CQ709C8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.74■□□□□ 0.27
VPS13CQ709C8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 AC005229.4-201ENST00000610085 2198 ntBASIC16.74■□□□□ 0.27
VPS13CQ709C8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
VPS13CQ709C8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS13CQ709C8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
VPS13CQ709C8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13CQ709C8 AL031985.4-201ENST00000642138 673 ntBASIC16.74■□□□□ 0.27
VPS13CQ709C8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 ATP5G1P1-201ENST00000448724 379 ntBASIC16.73■□□□□ 0.27
VPS13CQ709C8 B3GAT3P1-201ENST00000471720 806 ntBASIC16.73■□□□□ 0.27
VPS13CQ709C8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 TPM4P1-201ENST00000436100 807 ntBASIC16.73■□□□□ 0.27
VPS13CQ709C8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 AC139887.4-201ENST00000607877 719 ntBASIC16.73■□□□□ 0.27
VPS13CQ709C8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13CQ709C8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS13CQ709C8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13CQ709C8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13CQ709C8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13CQ709C8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 AC022616.7-201ENST00000525383 220 ntBASIC16.72■□□□□ 0.27
VPS13CQ709C8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 AC242852.2-201ENST00000615738 1807 ntBASIC16.72■□□□□ 0.27
VPS13CQ709C8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 PTBP1P-201ENST00000554374 1601 ntBASIC16.72■□□□□ 0.27
VPS13CQ709C8 AK4P3-201ENST00000418260 669 ntBASIC16.72■□□□□ 0.27
VPS13CQ709C8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13CQ709C8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13CQ709C8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13CQ709C8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13CQ709C8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
VPS13CQ709C8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms