Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AP001160.2-201ENST00000596071 487 ntBASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 TERC-201ENST00000602385 541 ntBASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 AC004980.1-204ENST00000429707 299 ntBASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
COL13A1Q5TAT6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 DUSP8P4-201ENST00000399538 1761 ntBASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 HLA-G-202ENST00000376815 851 ntBASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 BX119927.1-201ENST00000636596 1552 ntBASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL13A1Q5TAT6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 MIR940-201ENST00000401276 94 ntBASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 YBX1P10-201ENST00000444752 975 ntBASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 AP002414.4-201ENST00000589764 1148 ntBASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 AL356652.1-201ENST00000615962 565 ntBASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL13A1Q5TAT6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 STARP1-201ENST00000397973 869 ntBASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 AL035633.1-201ENST00000406139 838 ntBASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 KRT18P31-201ENST00000506277 1292 ntBASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 AL023803.3-201ENST00000615559 522 ntBASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL13A1Q5TAT6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 AL645929.1-201ENST00000420084 975 ntBASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 BX276092.5-203ENST00000456199 560 ntBASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 AC012615.1-201ENST00000565797 1299 ntBASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 AL121672.3-201ENST00000608644 468 ntBASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL13A1Q5TAT6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 KRT16P4-201ENST00000453883 522 ntBASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms