Protein–RNA interactions for Protein: Q3E7B6

VMA9, V-type proton ATPase subunit e, yeastyeast

Predictions only

Length 73 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA9Q3E7B6 YJL077W-AYJL077W-A 87 nt-3.29□□□□□ -2.94
VMA9Q3E7B6 CSE2YNR010W 450 nt-3.29□□□□□ -2.94
VMA9Q3E7B6 YOR121CYOR121C 306 nt-3.32□□□□□ -2.94
VMA9Q3E7B6 YGR240C-AYGR240C-A 201 nt-3.34□□□□□ -2.94
VMA9Q3E7B6 snR81snR81 201 nt-3.35□□□□□ -2.95
VMA9Q3E7B6 YBR285WYBR285W 435 nt-3.35□□□□□ -2.95
VMA9Q3E7B6 tQ(UUG)QtQ(UUG)Q 76 nt-3.41□□□□□ -2.96
VMA9Q3E7B6 YAF9YNL107W 681 nt-3.41□□□□□ -2.96
VMA9Q3E7B6 YFL012WYFL012W 447 nt-3.44□□□□□ -2.96
VMA9Q3E7B6 YDR426CYDR426C 378 nt-3.45□□□□□ -2.96
VMA9Q3E7B6 VPS20YMR077C 666 nt-3.48□□□□□ -2.97
VMA9Q3E7B6 snR39BsnR39B 96 nt-3.48□□□□□ -2.97
VMA9Q3E7B6 snR77snR77 88 nt-3.5□□□□□ -2.97
VMA9Q3E7B6 YMR193C-AYMR193C-A 387 nt-3.5□□□□□ -2.97
VMA9Q3E7B6 YNL266WYNL266W 420 nt-3.5□□□□□ -2.97
VMA9Q3E7B6 YDL011CYDL011C 324 nt-3.51□□□□□ -2.97
VMA9Q3E7B6 YER090C-AYER090C-A 90 nt-3.52□□□□□ -2.97
VMA9Q3E7B6 BI2Q0110 1272 nt-3.52□□□□□ -2.97
VMA9Q3E7B6 YMR315W-AYMR315W-A 108 nt-3.53□□□□□ -2.97
VMA9Q3E7B6 YNL205CYNL205C 423 nt-3.55□□□□□ -2.98
VMA9Q3E7B6 TOM22YNL131W 459 nt-3.58□□□□□ -2.98
VMA9Q3E7B6 RDS3YPR094W 324 nt-3.59□□□□□ -2.98
VMA9Q3E7B6 YDR544CYDR544C 429 nt-3.6□□□□□ -2.99
VMA9Q3E7B6 PRM3YPL192C 402 nt-3.6□□□□□ -2.99
VMA9Q3E7B6 YKL044WYKL044W 321 nt-3.61□□□□□ -2.99
VMA9Q3E7B6 ATG16YMR159C 453 nt-3.61□□□□□ -2.99
VMA9Q3E7B6 snR50snR50 90 nt-3.63□□□□□ -2.99
VMA9Q3E7B6 YOR293C-AYOR293C-A 150 nt-3.64□□□□□ -2.99
VMA9Q3E7B6 PCC1YKR095W-A 267 nt-3.66□□□□□ -3
VMA9Q3E7B6 YML054C-AYML054C-A 159 nt-3.66□□□□□ -3
VMA9Q3E7B6 YGR270C-AYGR270C-A 219 nt-3.71□□□□□ -3
VMA9Q3E7B6 GPI15YNL038W 690 nt-3.71□□□□□ -3
VMA9Q3E7B6 RPS27BYHR021C 249 nt-3.74□□□□□ -3.01
VMA9Q3E7B6 YLR202CYLR202C 327 nt-3.75□□□□□ -3.01
VMA9Q3E7B6 TSC3YBR058C-A 243 nt-3.75□□□□□ -3.01
VMA9Q3E7B6 snR69snR69 101 nt-3.76□□□□□ -3.01
VMA9Q3E7B6 YGR069WYGR069W 336 nt-3.77□□□□□ -3.01
VMA9Q3E7B6 YBL071CYBL071C 309 nt-3.77□□□□□ -3.01
VMA9Q3E7B6 YDR048CYDR048C 315 nt-3.78□□□□□ -3.01
VMA9Q3E7B6 YML099W-AYML099W-A 330 nt-3.8□□□□□ -3.02
VMA9Q3E7B6 YLR217WYLR217W 324 nt-3.81□□□□□ -3.02
VMA9Q3E7B6 snR67snR67 82 nt-3.82□□□□□ -3.02
VMA9Q3E7B6 YER175W-AYER175W-A 165 nt-3.85□□□□□ -3.03
VMA9Q3E7B6 YOR314W-AYOR314W-A 111 nt-3.85□□□□□ -3.03
VMA9Q3E7B6 YGR174W-AYGR174W-A 87 nt-3.88□□□□□ -3.03
VMA9Q3E7B6 snR9snR9 187 nt-3.9□□□□□ -3.03
VMA9Q3E7B6 YDL016CYDL016C 303 nt-3.92□□□□□ -3.04
VMA9Q3E7B6 EAF6YJR082C 342 nt-3.96□□□□□ -3.04
VMA9Q3E7B6 YGL149WYGL149W 306 nt-3.99□□□□□ -3.05
VMA9Q3E7B6 YLL019W-AYLL019W-A 93 nt-3.99□□□□□ -3.05
VMA9Q3E7B6 YDR102CYDR102C 333 nt-4□□□□□ -3.05
VMA9Q3E7B6 YJL197C-AYJL197C-A 282 nt-4□□□□□ -3.05
VMA9Q3E7B6 YOR309CYOR309C 381 nt-4□□□□□ -3.05
VMA9Q3E7B6 HMRA1YCR097W 381 nt-4.03□□□□□ -3.05
VMA9Q3E7B6 YOR008C-AYOR008C-A 225 nt-4.08□□□□□ -3.06
VMA9Q3E7B6 YIL029CYIL029C 429 nt-4.09□□□□□ -3.06
VMA9Q3E7B6 YMR172C-AYMR172C-A 384 nt-4.11□□□□□ -3.07
VMA9Q3E7B6 YAR047CYAR047C 321 nt-4.13□□□□□ -3.07
VMA9Q3E7B6 YBL039C-AYBL039C-A 84 nt-4.15□□□□□ -3.07
VMA9Q3E7B6 YDR543CYDR543C 300 nt-4.24□□□□□ -3.09
VMA9Q3E7B6 YER137W-AYER137W-A 306 nt-4.24□□□□□ -3.09
VMA9Q3E7B6 YIR021W-AYIR021W-A 213 nt-4.24□□□□□ -3.09
VMA9Q3E7B6 YAL068W-AYAL068W-A 255 nt-4.24□□□□□ -3.09
VMA9Q3E7B6 YLR269CYLR269C 351 nt-4.24□□□□□ -3.09
VMA9Q3E7B6 YIL115W-AYIL115W-A 372 nt-4.29□□□□□ -3.1
VMA9Q3E7B6 YDR524W-CYDR524W-C 90 nt-4.34□□□□□ -3.1
VMA9Q3E7B6 snR34snR34 203 nt-4.37□□□□□ -3.11
VMA9Q3E7B6 YBR182C-AYBR182C-A 195 nt-4.37□□□□□ -3.11
VMA9Q3E7B6 YER097WYER097W 330 nt-4.38□□□□□ -3.11
VMA9Q3E7B6 YOR072W-BYOR072W-B 162 nt-4.38□□□□□ -3.11
VMA9Q3E7B6 ATP19YOL077W-A 207 nt-4.39□□□□□ -3.11
VMA9Q3E7B6 YOL083C-AYOL083C-A 141 nt-4.41□□□□□ -3.12
VMA9Q3E7B6 YLR286W-AYLR286W-A 135 nt-4.42□□□□□ -3.12
VMA9Q3E7B6 YDL158CYDL158C 309 nt-4.44□□□□□ -3.12
VMA9Q3E7B6 CSN9YDR179C 489 nt-4.47□□□□□ -3.13
VMA9Q3E7B6 YLR342W-AYLR342W-A 174 nt-4.48□□□□□ -3.13
VMA9Q3E7B6 tD(GUC)QtD(GUC)Q 75 nt-4.49□□□□□ -3.13
VMA9Q3E7B6 YOR376W-AYOR376W-A 156 nt-4.51□□□□□ -3.13
VMA9Q3E7B6 YGR146C-AYGR146C-A 162 nt-4.55□□□□□ -3.14
VMA9Q3E7B6 YKL063CYKL063C 504 nt-4.59□□□□□ -3.14
VMA9Q3E7B6 MPC1YGL080W 393 nt-4.61□□□□□ -3.15
VMA9Q3E7B6 YDL159C-BYDL159C-B 177 nt-4.62□□□□□ -3.15
VMA9Q3E7B6 tM(CAU)Q2tM(CAU)Q2 78 nt-4.63□□□□□ -3.15
VMA9Q3E7B6 YFL032WYFL032W 321 nt-4.68□□□□□ -3.16
VMA9Q3E7B6 YBR178WYBR178W 375 nt-4.73□□□□□ -3.17
VMA9Q3E7B6 YFL019CYFL019C 354 nt-4.77□□□□□ -3.17
VMA9Q3E7B6 YBR196C-AYBR196C-A 150 nt-4.79□□□□□ -3.18
VMA9Q3E7B6 YLR406C-AYLR406C-A 150 nt-4.8□□□□□ -3.18
VMA9Q3E7B6 YOR316C-AYOR316C-A 210 nt-4.82□□□□□ -3.18
VMA9Q3E7B6 ATP6Q0085 780 nt-4.9□□□□□ -3.19
VMA9Q3E7B6 YJR157WYJR157W 363 nt-4.92□□□□□ -3.2
VMA9Q3E7B6 snR60snR60 104 nt-4.93□□□□□ -3.2
VMA9Q3E7B6 YOR381W-AYOR381W-A 168 nt-4.97□□□□□ -3.21
VMA9Q3E7B6 YPR197CYPR197C 564 nt-5.01□□□□□ -3.21
VMA9Q3E7B6 snR41snR41 95 nt-5.03□□□□□ -3.21
VMA9Q3E7B6 snR54snR54 86 nt-5.04□□□□□ -3.22
VMA9Q3E7B6 snR55snR55 98 nt-5.05□□□□□ -3.22
VMA9Q3E7B6 YLR299C-AYLR299C-A 93 nt-5.07□□□□□ -3.22
VMA9Q3E7B6 YHR180C-BYHR180C-B 105 nt-5.09□□□□□ -3.22
VMA9Q3E7B6 YOL013W-BYOL013W-B 291 nt-5.1□□□□□ -3.23
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms