Protein–RNA interactions for Protein: Q03280

TOM1, E3 ubiquitin-protein ligase TOM1, yeastyeast

Predictions only

Length 3,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOM1Q03280 snR72snR72 98 nt-3.66□□□□□ -3
TOM1Q03280 YER181CYER181C 324 nt-3.66□□□□□ -3
TOM1Q03280 SGF11YPL047W 300 nt-3.68□□□□□ -3
TOM1Q03280 YDR269CYDR269C 324 nt-3.69□□□□□ -3
TOM1Q03280 PCC1YKR095W-A 267 nt-3.7□□□□□ -3
TOM1Q03280 SMD2YLR275W 333 nt-3.7□□□□□ -3
TOM1Q03280 TOM22YNL131W 459 nt-3.7□□□□□ -3
TOM1Q03280 YOL155W-AYOL155W-A 135 nt-3.71□□□□□ -3
TOM1Q03280 snR50snR50 90 nt-3.71□□□□□ -3
TOM1Q03280 YDR366CYDR366C 399 nt-3.72□□□□□ -3
TOM1Q03280 MPC1YGL080W 393 nt-3.72□□□□□ -3.01
TOM1Q03280 RPL29YFR032C-A 180 nt-3.76□□□□□ -3.01
TOM1Q03280 YLR217WYLR217W 324 nt-3.76□□□□□ -3.01
TOM1Q03280 YLR456WYLR456W 615 nt-3.78□□□□□ -3.01
TOM1Q03280 GPI15YNL038W 690 nt-3.8□□□□□ -3.02
TOM1Q03280 YKL100W-AYKL100W-A 90 nt-3.84□□□□□ -3.02
TOM1Q03280 PRM3YPL192C 402 nt-3.86□□□□□ -3.03
TOM1Q03280 YJR087WYJR087W 351 nt-3.88□□□□□ -3.03
TOM1Q03280 YDR354C-AYDR354C-A 144 nt-3.9□□□□□ -3.03
TOM1Q03280 snR67snR67 82 nt-3.92□□□□□ -3.04
TOM1Q03280 YPR074W-AYPR074W-A 171 nt-3.92□□□□□ -3.04
TOM1Q03280 YOR376W-AYOR376W-A 156 nt-3.93□□□□□ -3.04
TOM1Q03280 YAR029WYAR029W 225 nt-3.94□□□□□ -3.04
TOM1Q03280 snR79snR79 84 nt-3.94□□□□□ -3.04
TOM1Q03280 YJL032WYJL032W 315 nt-3.94□□□□□ -3.04
TOM1Q03280 YPR197CYPR197C 564 nt-3.94□□□□□ -3.04
TOM1Q03280 YJL150WYJL150W 303 nt-3.95□□□□□ -3.04
TOM1Q03280 YBL107W-AYBL107W-A 105 nt-3.95□□□□□ -3.04
TOM1Q03280 snR73snR73 106 nt-3.97□□□□□ -3.05
TOM1Q03280 YER046W-AYER046W-A 330 nt-4□□□□□ -3.05
TOM1Q03280 snR6snR6 112 nt-4.01□□□□□ -3.05
TOM1Q03280 POP7YBR167C 423 nt-4.01□□□□□ -3.05
TOM1Q03280 YCR001WYCR001W 315 nt-4.04□□□□□ -3.06
TOM1Q03280 YKL083WYKL083W 615 nt-4.07□□□□□ -3.06
TOM1Q03280 snR51snR51 107 nt-4.08□□□□□ -3.06
TOM1Q03280 YKL202WYKL202W 582 nt-4.12□□□□□ -3.07
TOM1Q03280 snR87snR87 109 nt-4.12□□□□□ -3.07
TOM1Q03280 YDR544CYDR544C 429 nt-4.13□□□□□ -3.07
TOM1Q03280 YDR102CYDR102C 333 nt-4.14□□□□□ -3.07
TOM1Q03280 snR69snR69 101 nt-4.14□□□□□ -3.07
TOM1Q03280 YOR316C-AYOR316C-A 210 nt-4.14□□□□□ -3.07
TOM1Q03280 YEL020C-BYEL020C-B 198 nt-4.15□□□□□ -3.07
TOM1Q03280 HMRA2YCR096C 360 nt-4.16□□□□□ -3.08
TOM1Q03280 snR55snR55 98 nt-4.18□□□□□ -3.08
TOM1Q03280 tT(UGU)Q1tT(UGU)Q1 76 nt-4.18□□□□□ -3.08
TOM1Q03280 YML047W-AYML047W-A 366 nt-4.18□□□□□ -3.08
TOM1Q03280 YGR270C-AYGR270C-A 219 nt-4.2□□□□□ -3.08
TOM1Q03280 YER097WYER097W 330 nt-4.21□□□□□ -3.08
TOM1Q03280 YLR334CYLR334C 381 nt-4.22□□□□□ -3.08
TOM1Q03280 YML099W-AYML099W-A 330 nt-4.22□□□□□ -3.08
TOM1Q03280 YOR335W-AYOR335W-A 81 nt-4.22□□□□□ -3.08
TOM1Q03280 CWC23YGL128C 852 nt-4.22□□□□□ -3.09
TOM1Q03280 YDL159C-BYDL159C-B 177 nt-4.23□□□□□ -3.09
TOM1Q03280 snR80snR80 171 nt-4.23□□□□□ -3.09
TOM1Q03280 ILM1YJR118C 612 nt-4.26□□□□□ -3.09
TOM1Q03280 YDL158CYDL158C 309 nt-4.27□□□□□ -3.09
TOM1Q03280 YHR007C-AYHR007C-A 216 nt-4.27□□□□□ -3.09
TOM1Q03280 YNL303WYNL303W 348 nt-4.28□□□□□ -3.09
TOM1Q03280 YOR314W-AYOR314W-A 111 nt-4.28□□□□□ -3.09
TOM1Q03280 YNL146C-AYNL146C-A 195 nt-4.31□□□□□ -3.1
TOM1Q03280 POP6YGR030C 477 nt-4.32□□□□□ -3.1
TOM1Q03280 YGL230CYGL230C 444 nt-4.34□□□□□ -3.1
TOM1Q03280 YJR140W-AYJR140W-A 150 nt-4.34□□□□□ -3.1
TOM1Q03280 LSM4YER112W 564 nt-4.34□□□□□ -3.1
TOM1Q03280 RPL41BYDL133C-A 78 nt-4.37□□□□□ -3.11
TOM1Q03280 YOL013W-BYOL013W-B 291 nt-4.37□□□□□ -3.11
TOM1Q03280 YER137W-AYER137W-A 306 nt-4.44□□□□□ -3.12
TOM1Q03280 YIM2YMR151W 438 nt-4.46□□□□□ -3.12
TOM1Q03280 YPR012WYPR012W 255 nt-4.46□□□□□ -3.12
TOM1Q03280 YJL086CYJL086C 369 nt-4.48□□□□□ -3.13
TOM1Q03280 YBR196C-AYBR196C-A 150 nt-4.5□□□□□ -3.13
TOM1Q03280 ATG16YMR159C 453 nt-4.51□□□□□ -3.13
TOM1Q03280 YHR180C-BYHR180C-B 105 nt-4.53□□□□□ -3.13
TOM1Q03280 Q0255Q0255 1419 nt-4.53□□□□□ -3.13
TOM1Q03280 YGL006W-AYGL006W-A 111 nt-4.53□□□□□ -3.13
TOM1Q03280 YER188C-AYER188C-A 300 nt-4.56□□□□□ -3.14
TOM1Q03280 YLR286W-AYLR286W-A 135 nt-4.56□□□□□ -3.14
TOM1Q03280 YOL106WYOL106W 354 nt-4.56□□□□□ -3.14
TOM1Q03280 tD(GUC)QtD(GUC)Q 75 nt-4.57□□□□□ -3.14
TOM1Q03280 YDR220CYDR220C 294 nt-4.58□□□□□ -3.14
TOM1Q03280 YPR002C-AYPR002C-A 198 nt-4.59□□□□□ -3.14
TOM1Q03280 YGL149WYGL149W 306 nt-4.59□□□□□ -3.14
TOM1Q03280 YBL100W-CYBL100W-C 120 nt-4.59□□□□□ -3.14
TOM1Q03280 YAR047CYAR047C 321 nt-4.68□□□□□ -3.16
TOM1Q03280 YNL162W-AYNL162W-A 219 nt-4.68□□□□□ -3.16
TOM1Q03280 snR24snR24 89 nt-4.72□□□□□ -3.17
TOM1Q03280 YGR146C-AYGR146C-A 162 nt-4.77□□□□□ -3.17
TOM1Q03280 YKL106C-AYKL106C-A 120 nt-4.78□□□□□ -3.17
TOM1Q03280 VPS63YLR261C 327 nt-4.81□□□□□ -3.18
TOM1Q03280 snR41snR41 95 nt-4.82□□□□□ -3.18
TOM1Q03280 YDR413CYDR413C 576 nt-4.84□□□□□ -3.18
TOM1Q03280 YDR118W-AYDR118W-A 117 nt-4.85□□□□□ -3.19
TOM1Q03280 ATP6Q0085 780 nt-4.85□□□□□ -3.19
TOM1Q03280 YLR406C-AYLR406C-A 150 nt-4.85□□□□□ -3.19
TOM1Q03280 YDL011CYDL011C 324 nt-4.85□□□□□ -3.19
TOM1Q03280 YNL170WYNL170W 396 nt-4.86□□□□□ -3.19
TOM1Q03280 BUD26YDR241W 288 nt-4.9□□□□□ -3.19
TOM1Q03280 YOR329W-AYOR329W-A 210 nt-4.94□□□□□ -3.2
TOM1Q03280 YJL197C-AYJL197C-A 282 nt-4.94□□□□□ -3.2
TOM1Q03280 YBR178WYBR178W 375 nt-4.94□□□□□ -3.2
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms