Protein–RNA interactions for Protein: Q02648

TRM44, tRNA (uracil-O(2)-)-methyltransferase, yeastyeast

Known RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM44Q02648 snR56snR56 88 nt0.24□□□□□ -2.37
TRM44Q02648 YDR413CYDR413C 576 nt0.24□□□□□ -2.37
TRM44Q02648 ATP6Q0085 780 nt0.24□□□□□ -2.37
TRM44Q02648 YER097WYER097W 330 nt0.24□□□□□ -2.37
TRM44Q02648 ULI1YFR026C 510 nt0.24□□□□□ -2.37
TRM44Q02648 tR(ACG)Q2tR(ACG)Q2 74 nt0.24□□□□□ -2.37
TRM44Q02648 YKL136WYKL136W 399 nt0.24□□□□□ -2.37
TRM44Q02648 YLL019W-AYLL019W-A 93 nt0.24□□□□□ -2.37
TRM44Q02648 CSE2YNR010W 450 nt0.24□□□□□ -2.37
TRM44Q02648 BEM3YPL115C 3387 nt0.24□□□□□ -2.37
TRM44Q02648 MLP1YKR095W 5628 nt0.23□□□□□ -2.37
TRM44Q02648 ORC3YLL004W 1851 nt0.23□□□□□ -2.37
TRM44Q02648 YGR069WYGR069W 336 nt0.23□□□□□ -2.37
TRM44Q02648 YLR282CYLR282C 342 nt0.23□□□□□ -2.37
TRM44Q02648 snR74snR74 88 nt0.22□□□□□ -2.37
TRM44Q02648 YDR371C-AYDR371C-A 105 nt0.22□□□□□ -2.37
TRM44Q02648 YGL149WYGL149W 306 nt0.22□□□□□ -2.37
TRM44Q02648 YLR120W-AYLR120W-A 102 nt0.22□□□□□ -2.37
TRM44Q02648 YCR022CYCR022C 345 nt0.21□□□□□ -2.38
TRM44Q02648 YJL197C-AYJL197C-A 282 nt0.21□□□□□ -2.38
TRM44Q02648 NNF2YGR089W 2811 nt0.21□□□□□ -2.38
TRM44Q02648 RAD61YDR014W 1944 nt0.21□□□□□ -2.38
TRM44Q02648 YKL118WYKL118W 312 nt0.2□□□□□ -2.38
TRM44Q02648 YNL028WYNL028W 318 nt0.2□□□□□ -2.38
TRM44Q02648 snR45snR45 172 nt0.2□□□□□ -2.38
TRM44Q02648 YNL054W-BYNL054W-B 5250 nt0.19□□□□□ -2.38
TRM44Q02648 YEL020C-BYEL020C-B 198 nt0.19□□□□□ -2.38
TRM44Q02648 YGL123C-AYGL123C-A 231 nt0.19□□□□□ -2.38
TRM44Q02648 RPS26AYGL189C 360 nt0.19□□□□□ -2.38
TRM44Q02648 YPR010C-AYPR010C-A 219 nt0.19□□□□□ -2.38
TRM44Q02648 YMR172C-AYMR172C-A 384 nt0.18□□□□□ -2.38
TRM44Q02648 YER053C-AYER053C-A 114 nt0.17□□□□□ -2.38
TRM44Q02648 YGL052WYGL052W 306 nt0.17□□□□□ -2.38
TRM44Q02648 COX12YLR038C 252 nt0.17□□□□□ -2.38
TRM44Q02648 YNL146WYNL146W 303 nt0.17□□□□□ -2.38
TRM44Q02648 YLR041WYLR041W 321 nt0.16□□□□□ -2.38
TRM44Q02648 YNL277W-AYNL277W-A 189 nt0.16□□□□□ -2.38
TRM44Q02648 YOL013W-AYOL013W-A 192 nt0.16□□□□□ -2.38
TRM44Q02648 ESP1YGR098C 4893 nt0.15□□□□□ -2.38
TRM44Q02648 RCO1YMR075W 2055 nt0.15□□□□□ -2.38
TRM44Q02648 BLI1YKL061W 342 nt0.15□□□□□ -2.39
TRM44Q02648 YOR072W-BYOR072W-B 162 nt0.15□□□□□ -2.39
TRM44Q02648 NIP1YMR309C 2439 nt0.14□□□□□ -2.39
TRM44Q02648 YCR038W-AYCR038W-A 126 nt0.14□□□□□ -2.39
TRM44Q02648 RPL39YJL189W 156 nt0.14□□□□□ -2.39
TRM44Q02648 SNU13YEL026W 381 nt0.13□□□□□ -2.39
TRM44Q02648 YHR131W-AYHR131W-A 246 nt0.13□□□□□ -2.39
TRM44Q02648 YDR524W-CYDR524W-C 90 nt0.12□□□□□ -2.39
TRM44Q02648 YLL006W-AYLL006W-A 177 nt0.12□□□□□ -2.39
TRM44Q02648 YDR366CYDR366C 399 nt0.11□□□□□ -2.39
TRM44Q02648 MLP2YIL149C 5040 nt0.11□□□□□ -2.39
TRM44Q02648 YEL073CYEL073C 324 nt0.1□□□□□ -2.39
TRM44Q02648 YIL002W-AYIL002W-A 210 nt0.1□□□□□ -2.39
TRM44Q02648 YIR030W-AYIR030W-A 384 nt0.1□□□□□ -2.39
TRM44Q02648 tF(GAA)QtF(GAA)Q 75 nt0.09□□□□□ -2.4
TRM44Q02648 APQ12YIL040W 417 nt0.09□□□□□ -2.4
TRM44Q02648 YOR008C-AYOR008C-A 225 nt0.09□□□□□ -2.4
TRM44Q02648 YKL100W-AYKL100W-A 90 nt0.08□□□□□ -2.4
TRM44Q02648 YBR072C-AYBR072C-A 162 nt0.08□□□□□ -2.4
TRM44Q02648 CSE1YGL238W 2883 nt0.07□□□□□ -2.4
TRM44Q02648 YDR544CYDR544C 429 nt0.07□□□□□ -2.4
TRM44Q02648 YBR131C-AYBR131C-A 90 nt0.07□□□□□ -2.4
TRM44Q02648 YKU70YMR284W 1809 nt0.06□□□□□ -2.4
TRM44Q02648 snR65snR65 100 nt0.06□□□□□ -2.4
TRM44Q02648 YGL041CYGL041C 204 nt0.06□□□□□ -2.4
TRM44Q02648 YBR182C-AYBR182C-A 195 nt0.06□□□□□ -2.4
TRM44Q02648 SOV1YMR066W 2697 nt0.06□□□□□ -2.4
TRM44Q02648 SDH6YDR379C-A 240 nt0.05□□□□□ -2.4
TRM44Q02648 YLR232WYLR232W 348 nt0.05□□□□□ -2.4
TRM44Q02648 YPL152W-AYPL152W-A 99 nt0.05□□□□□ -2.4
TRM44Q02648 YMR158W-BYMR158W-B 321 nt0.04□□□□□ -2.4
TRM44Q02648 YOR186C-AYOR186C-A 210 nt0.04□□□□□ -2.4
TRM44Q02648 YOR231C-AYOR231C-A 201 nt0.04□□□□□ -2.4
TRM44Q02648 YEL014CYEL014C 306 nt0.03□□□□□ -2.4
TRM44Q02648 snR49snR49 165 nt0.03□□□□□ -2.4
TRM44Q02648 YBL039C-AYBL039C-A 84 nt0.02□□□□□ -2.41
TRM44Q02648 YOR302WYOR302W 78 nt0.02□□□□□ -2.41
TRM44Q02648 snR55snR55 98 nt0.01□□□□□ -2.41
TRM44Q02648 YNL097C-BYNL097C-B 123 nt0.01□□□□□ -2.41
TRM44Q02648 COG6YNL041C 2520 nt-0.01□□□□□ -2.41
TRM44Q02648 GLG1YKR058W 1851 nt-0.01□□□□□ -2.41
TRM44Q02648 YER181CYER181C 324 nt-0.01□□□□□ -2.41
TRM44Q02648 YJL182CYJL182C 318 nt-0.01□□□□□ -2.41
TRM44Q02648 YOL155W-AYOL155W-A 135 nt-0.01□□□□□ -2.41
TRM44Q02648 YBR099CYBR099C 384 nt-0.01□□□□□ -2.41
TRM44Q02648 snR80snR80 171 nt-0.02□□□□□ -2.41
TRM44Q02648 YGL182CYGL182C 324 nt-0.02□□□□□ -2.41
TRM44Q02648 Q0142Q0142 177 nt-0.03□□□□□ -2.41
TRM44Q02648 YML099W-AYML099W-A 330 nt-0.03□□□□□ -2.41
TRM44Q02648 EST1YLR233C 2100 nt-0.04□□□□□ -2.42
TRM44Q02648 YOR314W-AYOR314W-A 111 nt-0.05□□□□□ -2.42
TRM44Q02648 YGL188C-AYGL188C-A 141 nt-0.06□□□□□ -2.42
TRM44Q02648 YOR381W-AYOR381W-A 168 nt-0.07□□□□□ -2.42
TRM44Q02648 YPL060C-AYPL060C-A 3315 nt-0.08□□□□□ -2.42
TRM44Q02648 TFB5YDR079C-A 219 nt-0.08□□□□□ -2.42
TRM44Q02648 snR128snR128 126 nt-0.08□□□□□ -2.42
TRM44Q02648 snR8snR8 190 nt-0.09□□□□□ -2.42
TRM44Q02648 YDR210WYDR210W 228 nt-0.09□□□□□ -2.42
TRM44Q02648 YGR164WYGR164W 336 nt-0.11□□□□□ -2.43
TRM44Q02648 snR39BsnR39B 96 nt-0.11□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 28.9 ms