Protein–RNA interactions for Protein: P53882

TDA7, Topoisomerase I damage affected protein 7, yeastyeast

Predicted RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA7P53882 YLR282CYLR282C 342 nt1.06□□□□□ -2.24
TDA7P53882 YOR381W-AYOR381W-A 168 nt1.06□□□□□ -2.24
TDA7P53882 UTP20YBL004W 7482 nt1.06□□□□□ -2.24
TDA7P53882 YKL100W-AYKL100W-A 90 nt1.05□□□□□ -2.24
TDA7P53882 RAD9YDR217C 3930 nt1.05□□□□□ -2.24
TDA7P53882 YNL284C-BYNL284C-B 5268 nt1.05□□□□□ -2.24
TDA7P53882 snR190snR190 190 nt1.04□□□□□ -2.24
TDA7P53882 QCR9YGR183C 201 nt1.03□□□□□ -2.24
TDA7P53882 YIL020C-AYIL020C-A 339 nt1.03□□□□□ -2.24
TDA7P53882 BFR2YDR299W 1605 nt1.03□□□□□ -2.24
TDA7P53882 PRP42YDR235W 1635 nt1.02□□□□□ -2.25
TDA7P53882 YML002WYML002W 2214 nt1.01□□□□□ -2.25
TDA7P53882 PRP5YBR237W 2550 nt1□□□□□ -2.25
TDA7P53882 tF(GAA)BtF(GAA)B 73 nt0.99□□□□□ -2.25
TDA7P53882 tF(GAA)FtF(GAA)F 73 nt0.99□□□□□ -2.25
TDA7P53882 tF(GAA)GtF(GAA)G 73 nt0.99□□□□□ -2.25
TDA7P53882 tF(GAA)H1tF(GAA)H1 73 nt0.99□□□□□ -2.25
TDA7P53882 tF(GAA)H2tF(GAA)H2 73 nt0.99□□□□□ -2.25
TDA7P53882 tF(GAA)MtF(GAA)M 73 nt0.99□□□□□ -2.25
TDA7P53882 tF(GAA)P1tF(GAA)P1 73 nt0.99□□□□□ -2.25
TDA7P53882 tF(GAA)P2tF(GAA)P2 73 nt0.99□□□□□ -2.25
TDA7P53882 YIL142C-AYIL142C-A 333 nt0.99□□□□□ -2.25
TDA7P53882 YLR041WYLR041W 321 nt0.99□□□□□ -2.25
TDA7P53882 PRP16YKR086W 3216 nt0.99□□□□□ -2.25
TDA7P53882 FYV10YIL097W 1551 nt0.98□□□□□ -2.25
TDA7P53882 UTP8YGR128C 2142 nt0.97□□□□□ -2.25
TDA7P53882 SEC8YPR055W 3198 nt0.97□□□□□ -2.25
TDA7P53882 YPR160W-AYPR160W-A 81 nt0.94□□□□□ -2.26
TDA7P53882 YGL182CYGL182C 324 nt0.93□□□□□ -2.26
TDA7P53882 YLR399W-AYLR399W-A 105 nt0.93□□□□□ -2.26
TDA7P53882 BUD3YCL014W 4911 nt0.93□□□□□ -2.26
TDA7P53882 YDL007C-AYDL007C-A 258 nt0.92□□□□□ -2.26
TDA7P53882 YBL039C-AYBL039C-A 84 nt0.92□□□□□ -2.26
TDA7P53882 TAH1YCR060W 336 nt0.91□□□□□ -2.26
TDA7P53882 YBL053WYBL053W 375 nt0.91□□□□□ -2.26
TDA7P53882 YJR029WYJR029W 5268 nt0.91□□□□□ -2.26
TDA7P53882 YPR137C-BYPR137C-B 5268 nt0.91□□□□□ -2.26
TDA7P53882 BEM2YER155C 6504 nt0.9□□□□□ -2.26
TDA7P53882 YHL015W-AYHL015W-A 84 nt0.9□□□□□ -2.27
TDA7P53882 snR48snR48 113 nt0.9□□□□□ -2.27
TDA7P53882 NST1YNL091W 3723 nt0.89□□□□□ -2.27
TDA7P53882 tN(GUU)QtN(GUU)Q 71 nt0.89□□□□□ -2.27
TDA7P53882 YOR102WYOR102W 351 nt0.89□□□□□ -2.27
TDA7P53882 YOR170WYOR170W 306 nt0.89□□□□□ -2.27
TDA7P53882 YDL073WYDL073W 2955 nt0.89□□□□□ -2.27
TDA7P53882 YHR131W-AYHR131W-A 246 nt0.88□□□□□ -2.27
TDA7P53882 YLR232WYLR232W 348 nt0.88□□□□□ -2.27
TDA7P53882 YMR160WYMR160W 2451 nt0.87□□□□□ -2.27
TDA7P53882 MYO1YHR023W 5787 nt0.86□□□□□ -2.27
TDA7P53882 RKR1YMR247C 4689 nt0.85□□□□□ -2.27
TDA7P53882 SNU13YEL026W 381 nt0.85□□□□□ -2.27
TDA7P53882 tL(UAA)QtL(UAA)Q 85 nt0.84□□□□□ -2.27
TDA7P53882 VAM6YDL077C 3150 nt0.84□□□□□ -2.28
TDA7P53882 SCC2YDR180W 4482 nt0.83□□□□□ -2.28
TDA7P53882 CHS6YJL099W 2241 nt0.83□□□□□ -2.28
TDA7P53882 OST4YDL232W 111 nt0.82□□□□□ -2.28
TDA7P53882 YSP1YHR155W 3687 nt0.81□□□□□ -2.28
TDA7P53882 YDR544CYDR544C 429 nt0.81□□□□□ -2.28
TDA7P53882 YOR314W-AYOR314W-A 111 nt0.81□□□□□ -2.28
TDA7P53882 Q0092Q0092 141 nt0.8□□□□□ -2.28
TDA7P53882 YGR164WYGR164W 336 nt0.8□□□□□ -2.28
TDA7P53882 YOL014WYOL014W 375 nt0.8□□□□□ -2.28
TDA7P53882 YOR329W-AYOR329W-A 210 nt0.8□□□□□ -2.28
TDA7P53882 DOP1YDR141C 5097 nt0.79□□□□□ -2.28
TDA7P53882 ATP8Q0080 147 nt0.79□□□□□ -2.28
TDA7P53882 BEM3YPL115C 3387 nt0.79□□□□□ -2.28
TDA7P53882 EMT1tM(CAU)D 73 nt0.77□□□□□ -2.29
TDA7P53882 EMT5tM(CAU)J1 73 nt0.77□□□□□ -2.29
TDA7P53882 EMT3tM(CAU)J2 73 nt0.77□□□□□ -2.29
TDA7P53882 EMT4tM(CAU)M 73 nt0.77□□□□□ -2.29
TDA7P53882 EMT2tM(CAU)O2 73 nt0.77□□□□□ -2.29
TDA7P53882 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
TDA7P53882 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
TDA7P53882 RPM2YML091C 3609 nt0.76□□□□□ -2.29
TDA7P53882 COG6YNL041C 2520 nt0.76□□□□□ -2.29
TDA7P53882 SDH6YDR379C-A 240 nt0.75□□□□□ -2.29
TDA7P53882 YNL170WYNL170W 396 nt0.75□□□□□ -2.29
TDA7P53882 snR39BsnR39B 96 nt0.75□□□□□ -2.29
TDA7P53882 tM(CAU)Q2tM(CAU)Q2 78 nt0.74□□□□□ -2.29
TDA7P53882 YJL127W-AYJL127W-A 117 nt0.73□□□□□ -2.29
TDA7P53882 SEC1YDR164C 2175 nt0.72□□□□□ -2.29
TDA7P53882 YBR072C-AYBR072C-A 162 nt0.72□□□□□ -2.29
TDA7P53882 YKL145W-AYKL145W-A 93 nt0.71□□□□□ -2.3
TDA7P53882 YNL067W-BYNL067W-B 141 nt0.71□□□□□ -2.3
TDA7P53882 ULP2YIL031W 3105 nt0.71□□□□□ -2.3
TDA7P53882 BIR1YJR089W 2865 nt0.7□□□□□ -2.3
TDA7P53882 YDR210WYDR210W 228 nt0.7□□□□□ -2.3
TDA7P53882 NNF2YGR089W 2811 nt0.7□□□□□ -2.3
TDA7P53882 GLG1YKR058W 1851 nt0.69□□□□□ -2.3
TDA7P53882 YLL006W-AYLL006W-A 177 nt0.68□□□□□ -2.3
TDA7P53882 FMP27YLR454W 7887 nt0.67□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 28.8 ms