Protein–RNA interactions for Protein: P53135

SLD3, DNA replication regulator SLD3, yeastyeast

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLD3P53135 PRP5YBR237W 2550 nt1.07□□□□□ -2.24
SLD3P53135 tV(UAC)BtV(UAC)B 74 nt1.06□□□□□ -2.24
SLD3P53135 tV(UAC)DtV(UAC)D 74 nt1.06□□□□□ -2.24
SLD3P53135 YLR466C-BYLR466C-B 117 nt1.06□□□□□ -2.24
SLD3P53135 YNL198CYNL198C 303 nt1.06□□□□□ -2.24
SLD3P53135 YPR117WYPR117W 7470 nt1.06□□□□□ -2.24
SLD3P53135 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
SLD3P53135 UTP8YGR128C 2142 nt1.06□□□□□ -2.24
SLD3P53135 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
SLD3P53135 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
SLD3P53135 Q0032Q0032 291 nt1.04□□□□□ -2.24
SLD3P53135 RKR1YMR247C 4689 nt1.04□□□□□ -2.24
SLD3P53135 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
SLD3P53135 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
SLD3P53135 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
SLD3P53135 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
SLD3P53135 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
SLD3P53135 YGR151CYGR151C 336 nt1.03□□□□□ -2.24
SLD3P53135 YGL007C-AYGL007C-A 87 nt1.02□□□□□ -2.25
SLD3P53135 tN(GUU)QtN(GUU)Q 71 nt1.02□□□□□ -2.25
SLD3P53135 TRS65YGR166W 1683 nt1.02□□□□□ -2.25
SLD3P53135 CHS6YJL099W 2241 nt1.01□□□□□ -2.25
SLD3P53135 YHR131W-AYHR131W-A 246 nt1□□□□□ -2.25
SLD3P53135 BUD3YCL014W 4911 nt1□□□□□ -2.25
SLD3P53135 UBP3YER151C 2739 nt1□□□□□ -2.25
SLD3P53135 BEM2YER155C 6504 nt0.99□□□□□ -2.25
SLD3P53135 OST4YDL232W 111 nt0.99□□□□□ -2.25
SLD3P53135 YOR225WYOR225W 330 nt0.99□□□□□ -2.25
SLD3P53135 YOR381W-AYOR381W-A 168 nt0.99□□□□□ -2.25
SLD3P53135 YGL182CYGL182C 324 nt0.98□□□□□ -2.25
SLD3P53135 SIP4YJL089W 2490 nt0.97□□□□□ -2.25
SLD3P53135 TAH1YCR060W 336 nt0.97□□□□□ -2.25
SLD3P53135 YBL039C-AYBL039C-A 84 nt0.97□□□□□ -2.25
SLD3P53135 YSP1YHR155W 3687 nt0.96□□□□□ -2.26
SLD3P53135 SNU13YEL026W 381 nt0.96□□□□□ -2.26
SLD3P53135 YLR232WYLR232W 348 nt0.96□□□□□ -2.26
SLD3P53135 HUG1YML058W-A 207 nt0.95□□□□□ -2.26
SLD3P53135 STF2YGR008C 255 nt0.94□□□□□ -2.26
SLD3P53135 YOR170WYOR170W 306 nt0.93□□□□□ -2.26
SLD3P53135 MYO1YHR023W 5787 nt0.91□□□□□ -2.26
SLD3P53135 DOP1YDR141C 5097 nt0.9□□□□□ -2.26
SLD3P53135 RPM2YML091C 3609 nt0.9□□□□□ -2.27
SLD3P53135 BEM3YPL115C 3387 nt0.89□□□□□ -2.27
SLD3P53135 YJL127W-AYJL127W-A 117 nt0.89□□□□□ -2.27
SLD3P53135 LTE1YAL024C 4308 nt0.89□□□□□ -2.27
SLD3P53135 SEC1YDR164C 2175 nt0.89□□□□□ -2.27
SLD3P53135 YNL338WYNL338W 159 nt0.87□□□□□ -2.27
SLD3P53135 snR48snR48 113 nt0.87□□□□□ -2.27
SLD3P53135 PAU24YBR301W 363 nt0.84□□□□□ -2.27
SLD3P53135 YDR544CYDR544C 429 nt0.83□□□□□ -2.28
SLD3P53135 YHL015W-AYHL015W-A 84 nt0.83□□□□□ -2.28
SLD3P53135 NNF2YGR089W 2811 nt0.81□□□□□ -2.28
SLD3P53135 YLR294CYLR294C 330 nt0.81□□□□□ -2.28
SLD3P53135 YOR102WYOR102W 351 nt0.81□□□□□ -2.28
SLD3P53135 COG6YNL041C 2520 nt0.8□□□□□ -2.28
SLD3P53135 YBR072C-AYBR072C-A 162 nt0.8□□□□□ -2.28
SLD3P53135 ULP2YIL031W 3105 nt0.8□□□□□ -2.28
SLD3P53135 YOR314W-AYOR314W-A 111 nt0.79□□□□□ -2.28
SLD3P53135 tL(UAA)QtL(UAA)Q 85 nt0.78□□□□□ -2.28
SLD3P53135 YLL006W-AYLL006W-A 177 nt0.77□□□□□ -2.29
SLD3P53135 YBL053WYBL053W 375 nt0.77□□□□□ -2.29
SLD3P53135 GLG1YKR058W 1851 nt0.77□□□□□ -2.29
SLD3P53135 PET111YMR257C 2403 nt0.76□□□□□ -2.29
SLD3P53135 SDH6YDR379C-A 240 nt0.76□□□□□ -2.29
SLD3P53135 YOR329W-AYOR329W-A 210 nt0.76□□□□□ -2.29
SLD3P53135 YOR192C-BYOR192C-B 5313 nt0.75□□□□□ -2.29
SLD3P53135 BUL2YML111W 2763 nt0.74□□□□□ -2.29
SLD3P53135 NIP1YMR309C 2439 nt0.73□□□□□ -2.29
SLD3P53135 YDL007C-AYDL007C-A 258 nt0.73□□□□□ -2.29
SLD3P53135 PAU12YGR294W 363 nt0.73□□□□□ -2.29
SLD3P53135 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
SLD3P53135 tM(CAU)Q2tM(CAU)Q2 78 nt0.72□□□□□ -2.29
SLD3P53135 UTP20YBL004W 7482 nt0.7□□□□□ -2.3
SLD3P53135 RPS26AYGL189C 360 nt0.69□□□□□ -2.3
SLD3P53135 snR39BsnR39B 96 nt0.69□□□□□ -2.3
SLD3P53135 QCR9YGR183C 201 nt0.68□□□□□ -2.3
SLD3P53135 MLP1YKR095W 5628 nt0.67□□□□□ -2.3
SLD3P53135 YDR371C-AYDR371C-A 105 nt0.67□□□□□ -2.3
SLD3P53135 YDR210WYDR210W 228 nt0.66□□□□□ -2.3
SLD3P53135 YIL142C-AYIL142C-A 333 nt0.66□□□□□ -2.3
SLD3P53135 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
SLD3P53135 tF(GAA)BtF(GAA)B 73 nt0.64□□□□□ -2.31
SLD3P53135 tF(GAA)FtF(GAA)F 73 nt0.64□□□□□ -2.31
SLD3P53135 tF(GAA)GtF(GAA)G 73 nt0.64□□□□□ -2.31
SLD3P53135 tF(GAA)H1tF(GAA)H1 73 nt0.64□□□□□ -2.31
SLD3P53135 tF(GAA)H2tF(GAA)H2 73 nt0.64□□□□□ -2.31
SLD3P53135 tF(GAA)MtF(GAA)M 73 nt0.64□□□□□ -2.31
SLD3P53135 tF(GAA)P1tF(GAA)P1 73 nt0.64□□□□□ -2.31
SLD3P53135 tF(GAA)P2tF(GAA)P2 73 nt0.64□□□□□ -2.31
SLD3P53135 SBH1YER087C-B 249 nt0.64□□□□□ -2.31
SLD3P53135 IQG1YPL242C 4488 nt0.62□□□□□ -2.31
SLD3P53135 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
SLD3P53135 ORC3YLL004W 1851 nt0.61□□□□□ -2.31
SLD3P53135 YGR146C-AYGR146C-A 162 nt0.61□□□□□ -2.31
SLD3P53135 YNL067W-BYNL067W-B 141 nt0.61□□□□□ -2.31
SLD3P53135 YMR160WYMR160W 2451 nt0.61□□□□□ -2.31
SLD3P53135 tT(AGU)BtT(AGU)B 73 nt0.6□□□□□ -2.31
SLD3P53135 tT(AGU)CtT(AGU)C 73 nt0.6□□□□□ -2.31
SLD3P53135 tT(AGU)DtT(AGU)D 73 nt0.6□□□□□ -2.31
SLD3P53135 tT(AGU)HtT(AGU)H 73 nt0.6□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 8 ms