Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 DUX4L16-201ENST00000555130 1264 ntBASIC17.75■□□□□ 0.43
SLC25A1P53007 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.75■□□□□ 0.43
SLC25A1P53007 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC25A1P53007 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC25A1P53007 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC25A1P53007 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC25A1P53007 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC25A1P53007 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC25A1P53007 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC25A1P53007 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC25A1P53007 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC25A1P53007 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC25A1P53007 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC25A1P53007 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.74■□□□□ 0.43
SLC25A1P53007 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC25A1P53007 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.74■□□□□ 0.43
SLC25A1P53007 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC25A1P53007 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 AP001271.2-201ENST00000624018 1556 ntBASIC17.74■□□□□ 0.43
SLC25A1P53007 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC25A1P53007 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC25A1P53007 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC25A1P53007 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC25A1P53007 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC25A1P53007 AC005332.7-201ENST00000614046 2005 ntBASIC17.73■□□□□ 0.43
SLC25A1P53007 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC25A1P53007 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC25A1P53007 AC016769.1-201ENST00000409132 1010 ntBASIC17.73■□□□□ 0.43
SLC25A1P53007 KRT18P5-201ENST00000436075 1291 ntBASIC17.73■□□□□ 0.43
SLC25A1P53007 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC25A1P53007 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC25A1P53007 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC25A1P53007 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC25A1P53007 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SLC25A1P53007 CYP2T3P-201ENST00000601990 817 ntBASIC17.73■□□□□ 0.43
SLC25A1P53007 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC25A1P53007 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC25A1P53007 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC25A1P53007 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC25A1P53007 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC25A1P53007 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC25A1P53007 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC25A1P53007 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC25A1P53007 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC25A1P53007 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC25A1P53007 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 AC018445.3-201ENST00000624177 1945 ntBASIC17.72■□□□□ 0.43
SLC25A1P53007 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SLC25A1P53007 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC25A1P53007 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC25A1P53007 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 HLA-G-202ENST00000376815 851 ntBASIC17.72■□□□□ 0.43
SLC25A1P53007 HLA-G-203ENST00000376818 1127 ntBASIC17.72■□□□□ 0.43
SLC25A1P53007 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC25A1P53007 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.72■□□□□ 0.43
SLC25A1P53007 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.72■□□□□ 0.43
SLC25A1P53007 AC069236.1-201ENST00000604339 616 ntBASIC17.72■□□□□ 0.43
SLC25A1P53007 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC25A1P53007 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC25A1P53007 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SLC25A1P53007 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC25A1P53007 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC25A1P53007 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC25A1P53007 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC25A1P53007 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
SLC25A1P53007 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC25A1P53007 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC25A1P53007 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SLC25A1P53007 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.71■□□□□ 0.43
SLC25A1P53007 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms