Protein–RNA interactions for Protein: P43321

SMD3, Small nuclear ribonucleoprotein Sm D3, yeastyeast

Known RBP Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD3P43321 YDL240C-AYDL240C-A 138 nt0.07□□□□□ -2.4
SMD3P43321 YFL032WYFL032W 321 nt0.07□□□□□ -2.4
SMD3P43321 YBR072C-AYBR072C-A 162 nt0.06□□□□□ -2.4
SMD3P43321 CSE1YGL238W 2883 nt0.06□□□□□ -2.4
SMD3P43321 RCO1YMR075W 2055 nt0.06□□□□□ -2.4
SMD3P43321 MLP2YIL149C 5040 nt0.05□□□□□ -2.4
SMD3P43321 RPS30BYOR182C 192 nt0.05□□□□□ -2.4
SMD3P43321 YER053C-AYER053C-A 114 nt0.03□□□□□ -2.4
SMD3P43321 YLR041WYLR041W 321 nt0.03□□□□□ -2.4
SMD3P43321 YKU70YMR284W 1809 nt0.02□□□□□ -2.41
SMD3P43321 AI1Q0050 2505 nt0.02□□□□□ -2.41
SMD3P43321 YDR413CYDR413C 576 nt0.02□□□□□ -2.41
SMD3P43321 ATP6Q0085 780 nt0.02□□□□□ -2.41
SMD3P43321 YGR069WYGR069W 336 nt0.02□□□□□ -2.41
SMD3P43321 RPL39YJL189W 156 nt0.02□□□□□ -2.41
SMD3P43321 YKL118WYKL118W 312 nt0.01□□□□□ -2.41
SMD3P43321 YCR038W-AYCR038W-A 126 nt0□□□□□ -2.41
SMD3P43321 RAD61YDR014W 1944 nt0□□□□□ -2.41
SMD3P43321 YLR232WYLR232W 348 nt0□□□□□ -2.41
SMD3P43321 YEL073CYEL073C 324 nt-0.01□□□□□ -2.41
SMD3P43321 YLR120W-AYLR120W-A 102 nt-0.01□□□□□ -2.41
SMD3P43321 IQG1YPL242C 4488 nt-0.02□□□□□ -2.41
SMD3P43321 YMR158W-BYMR158W-B 321 nt-0.02□□□□□ -2.41
SMD3P43321 YOR015WYOR015W 360 nt-0.02□□□□□ -2.41
SMD3P43321 STE5YDR103W 2754 nt-0.03□□□□□ -2.41
SMD3P43321 GIM4YEL003W 336 nt-0.03□□□□□ -2.41
SMD3P43321 YGL052WYGL052W 306 nt-0.03□□□□□ -2.41
SMD3P43321 YIL002W-AYIL002W-A 210 nt-0.04□□□□□ -2.42
SMD3P43321 YKL145W-AYKL145W-A 93 nt-0.04□□□□□ -2.42
SMD3P43321 GLG1YKR058W 1851 nt-0.05□□□□□ -2.42
SMD3P43321 snR74snR74 88 nt-0.05□□□□□ -2.42
SMD3P43321 YHR175W-AYHR175W-A 150 nt-0.05□□□□□ -2.42
SMD3P43321 YOR008C-AYOR008C-A 225 nt-0.05□□□□□ -2.42
SMD3P43321 YER097WYER097W 330 nt-0.06□□□□□ -2.42
SMD3P43321 APQ12YIL040W 417 nt-0.06□□□□□ -2.42
SMD3P43321 snR128snR128 126 nt-0.06□□□□□ -2.42
SMD3P43321 HMRA1YCR097W 381 nt-0.07□□□□□ -2.42
SMD3P43321 MYO1YHR023W 5787 nt-0.07□□□□□ -2.42
SMD3P43321 YBL100W-BYBL100W-B 5313 nt-0.07□□□□□ -2.42
SMD3P43321 BUL2YML111W 2763 nt-0.08□□□□□ -2.42
SMD3P43321 SDH6YDR379C-A 240 nt-0.08□□□□□ -2.42
SMD3P43321 YDR544CYDR544C 429 nt-0.08□□□□□ -2.42
SMD3P43321 YMR172C-AYMR172C-A 384 nt-0.09□□□□□ -2.42
SMD3P43321 snR56snR56 88 nt-0.1□□□□□ -2.43
SMD3P43321 HUG1YML058W-A 207 nt-0.1□□□□□ -2.43
SMD3P43321 PRP39YML046W 1890 nt-0.1□□□□□ -2.43
SMD3P43321 TAH1YCR060W 336 nt-0.11□□□□□ -2.43
SMD3P43321 YBR099CYBR099C 384 nt-0.11□□□□□ -2.43
SMD3P43321 snR8snR8 190 nt-0.15□□□□□ -2.43
SMD3P43321 EST1YLR233C 2100 nt-0.15□□□□□ -2.43
SMD3P43321 YBR182C-AYBR182C-A 195 nt-0.15□□□□□ -2.43
SMD3P43321 YIR030W-AYIR030W-A 384 nt-0.16□□□□□ -2.44
SMD3P43321 YGL041CYGL041C 204 nt-0.17□□□□□ -2.44
SMD3P43321 STF2YGR008C 255 nt-0.17□□□□□ -2.44
SMD3P43321 tR(ACG)Q2tR(ACG)Q2 74 nt-0.17□□□□□ -2.44
SMD3P43321 YML099W-AYML099W-A 330 nt-0.17□□□□□ -2.44
SMD3P43321 SOV1YMR066W 2697 nt-0.18□□□□□ -2.44
SMD3P43321 COG6YNL041C 2520 nt-0.18□□□□□ -2.44
SMD3P43321 tF(GAA)BtF(GAA)B 73 nt-0.18□□□□□ -2.44
SMD3P43321 tF(GAA)FtF(GAA)F 73 nt-0.18□□□□□ -2.44
SMD3P43321 tF(GAA)GtF(GAA)G 73 nt-0.18□□□□□ -2.44
SMD3P43321 tF(GAA)H1tF(GAA)H1 73 nt-0.18□□□□□ -2.44
SMD3P43321 tF(GAA)H2tF(GAA)H2 73 nt-0.18□□□□□ -2.44
SMD3P43321 tF(GAA)MtF(GAA)M 73 nt-0.18□□□□□ -2.44
SMD3P43321 tF(GAA)P1tF(GAA)P1 73 nt-0.18□□□□□ -2.44
SMD3P43321 tF(GAA)P2tF(GAA)P2 73 nt-0.18□□□□□ -2.44
SMD3P43321 YNL277W-AYNL277W-A 189 nt-0.18□□□□□ -2.44
SMD3P43321 snR55snR55 98 nt-0.19□□□□□ -2.44
SMD3P43321 ESP1YGR098C 4893 nt-0.2□□□□□ -2.44
SMD3P43321 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
SMD3P43321 YBL039C-AYBL039C-A 84 nt-0.22□□□□□ -2.44
SMD3P43321 snR45snR45 172 nt-0.25□□□□□ -2.45
SMD3P43321 snR49snR49 165 nt-0.25□□□□□ -2.45
SMD3P43321 YGL182CYGL182C 324 nt-0.26□□□□□ -2.45
SMD3P43321 tF(GAA)QtF(GAA)Q 75 nt-0.27□□□□□ -2.45
SMD3P43321 YER078W-AYER078W-A 165 nt-0.27□□□□□ -2.45
SMD3P43321 YOR314W-AYOR314W-A 111 nt-0.27□□□□□ -2.45
SMD3P43321 YBR131C-AYBR131C-A 90 nt-0.27□□□□□ -2.45
SMD3P43321 snR65snR65 100 nt-0.28□□□□□ -2.45
SMD3P43321 YER181CYER181C 324 nt-0.28□□□□□ -2.45
SMD3P43321 THO2YNL139C 4794 nt-0.29□□□□□ -2.46
SMD3P43321 YPR010C-AYPR010C-A 219 nt-0.29□□□□□ -2.46
SMD3P43321 YEL014CYEL014C 306 nt-0.3□□□□□ -2.46
SMD3P43321 YOL155W-AYOL155W-A 135 nt-0.3□□□□□ -2.46
SMD3P43321 YDR210WYDR210W 228 nt-0.31□□□□□ -2.46
SMD3P43321 YDR524W-CYDR524W-C 90 nt-0.32□□□□□ -2.46
SMD3P43321 tM(CAU)Q2tM(CAU)Q2 78 nt-0.32□□□□□ -2.46
SMD3P43321 YOL014WYOL014W 375 nt-0.32□□□□□ -2.46
SMD3P43321 YJL182CYJL182C 318 nt-0.34□□□□□ -2.46
SMD3P43321 YGR164WYGR164W 336 nt-0.35□□□□□ -2.47
SMD3P43321 tQ(UUG)QtQ(UUG)Q 76 nt-0.36□□□□□ -2.47
SMD3P43321 YJL077W-AYJL077W-A 87 nt-0.36□□□□□ -2.47
SMD3P43321 YOR381W-AYOR381W-A 168 nt-0.36□□□□□ -2.47
SMD3P43321 YIL071W-AYIL071W-A 477 nt-0.37□□□□□ -2.47
SMD3P43321 YPL152W-AYPL152W-A 99 nt-0.38□□□□□ -2.47
SMD3P43321 YGL188C-AYGL188C-A 141 nt-0.41□□□□□ -2.48
SMD3P43321 snR39BsnR39B 96 nt-0.41□□□□□ -2.48
SMD3P43321 YOR170WYOR170W 306 nt-0.42□□□□□ -2.48
SMD3P43321 PAU9YBL108C-A 129 nt-0.43□□□□□ -2.48
SMD3P43321 snR69snR69 101 nt-0.48□□□□□ -2.49
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms