Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 YPL229WYPL229W 621 nt-1.81□□□□□ -2.7
VTH1P40438 TSC3YBR058C-A 243 nt-1.81□□□□□ -2.7
VTH1P40438 VPS20YMR077C 666 nt-1.82□□□□□ -2.7
VTH1P40438 CBS1YDL069C 690 nt-1.83□□□□□ -2.7
VTH1P40438 CSE2YNR010W 450 nt-1.83□□□□□ -2.7
VTH1P40438 CDC65tQ(CUG)M 72 nt-1.84□□□□□ -2.7
VTH1P40438 YFL012WYFL012W 447 nt-1.85□□□□□ -2.71
VTH1P40438 tQ(UUG)QtQ(UUG)Q 76 nt-1.86□□□□□ -2.71
VTH1P40438 YOR121CYOR121C 306 nt-1.86□□□□□ -2.71
VTH1P40438 snR81snR81 201 nt-1.87□□□□□ -2.71
VTH1P40438 YJL077W-AYJL077W-A 87 nt-1.87□□□□□ -2.71
VTH1P40438 YBR285WYBR285W 435 nt-1.87□□□□□ -2.71
VTH1P40438 YER090C-AYER090C-A 90 nt-1.88□□□□□ -2.71
VTH1P40438 YGR270C-AYGR270C-A 219 nt-1.88□□□□□ -2.71
VTH1P40438 YLR217WYLR217W 324 nt-1.88□□□□□ -2.71
VTH1P40438 YAF9YNL107W 681 nt-1.88□□□□□ -2.71
VTH1P40438 YER175W-AYER175W-A 165 nt-1.89□□□□□ -2.71
VTH1P40438 YBL071CYBL071C 309 nt-1.89□□□□□ -2.71
VTH1P40438 snR9snR9 187 nt-1.9□□□□□ -2.71
VTH1P40438 YMR193C-AYMR193C-A 387 nt-1.91□□□□□ -2.72
VTH1P40438 YBR126W-BYBR126W-B 144 nt-1.91□□□□□ -2.72
VTH1P40438 snR77snR77 88 nt-1.92□□□□□ -2.72
VTH1P40438 PRM3YPL192C 402 nt-1.92□□□□□ -2.72
VTH1P40438 BI2Q0110 1272 nt-1.93□□□□□ -2.72
VTH1P40438 TOM22YNL131W 459 nt-1.94□□□□□ -2.72
VTH1P40438 YDR544CYDR544C 429 nt-1.95□□□□□ -2.72
VTH1P40438 GPI15YNL038W 690 nt-1.96□□□□□ -2.72
VTH1P40438 YNL266WYNL266W 420 nt-1.96□□□□□ -2.72
VTH1P40438 YGR069WYGR069W 336 nt-1.96□□□□□ -2.72
VTH1P40438 PCC1YKR095W-A 267 nt-1.97□□□□□ -2.73
VTH1P40438 YNL205CYNL205C 423 nt-1.97□□□□□ -2.73
VTH1P40438 YGR240C-AYGR240C-A 201 nt-1.98□□□□□ -2.73
VTH1P40438 YKL044WYKL044W 321 nt-1.99□□□□□ -2.73
VTH1P40438 snR34snR34 203 nt-2.01□□□□□ -2.73
VTH1P40438 snR39BsnR39B 96 nt-2.01□□□□□ -2.73
VTH1P40438 snR50snR50 90 nt-2.02□□□□□ -2.73
VTH1P40438 YGR174W-AYGR174W-A 87 nt-2.04□□□□□ -2.74
VTH1P40438 RPS27BYHR021C 249 nt-2.06□□□□□ -2.74
VTH1P40438 YOR314W-AYOR314W-A 111 nt-2.06□□□□□ -2.74
VTH1P40438 YDL016CYDL016C 303 nt-2.07□□□□□ -2.74
VTH1P40438 YML054C-AYML054C-A 159 nt-2.07□□□□□ -2.74
VTH1P40438 YIL029CYIL029C 429 nt-2.07□□□□□ -2.74
VTH1P40438 YLL019W-AYLL019W-A 93 nt-2.08□□□□□ -2.74
VTH1P40438 YBL039C-AYBL039C-A 84 nt-2.08□□□□□ -2.74
VTH1P40438 RDS3YPR094W 324 nt-2.08□□□□□ -2.74
VTH1P40438 YLR202CYLR202C 327 nt-2.1□□□□□ -2.75
VTH1P40438 YMR315W-AYMR315W-A 108 nt-2.1□□□□□ -2.75
VTH1P40438 YML099W-AYML099W-A 330 nt-2.12□□□□□ -2.75
VTH1P40438 snR69snR69 101 nt-2.13□□□□□ -2.75
VTH1P40438 YOR293C-AYOR293C-A 150 nt-2.16□□□□□ -2.75
VTH1P40438 HMRA1YCR097W 381 nt-2.17□□□□□ -2.76
VTH1P40438 YJL197C-AYJL197C-A 282 nt-2.17□□□□□ -2.76
VTH1P40438 YGL149WYGL149W 306 nt-2.17□□□□□ -2.76
VTH1P40438 YAR047CYAR047C 321 nt-2.18□□□□□ -2.76
VTH1P40438 snR67snR67 82 nt-2.19□□□□□ -2.76
VTH1P40438 YDR048CYDR048C 315 nt-2.19□□□□□ -2.76
VTH1P40438 YDR102CYDR102C 333 nt-2.22□□□□□ -2.77
VTH1P40438 YLR269CYLR269C 351 nt-2.23□□□□□ -2.77
VTH1P40438 YIL115W-AYIL115W-A 372 nt-2.24□□□□□ -2.77
VTH1P40438 YDR543CYDR543C 300 nt-2.25□□□□□ -2.77
VTH1P40438 YAL068W-AYAL068W-A 255 nt-2.25□□□□□ -2.77
VTH1P40438 YOR008C-AYOR008C-A 225 nt-2.27□□□□□ -2.77
VTH1P40438 YER137W-AYER137W-A 306 nt-2.29□□□□□ -2.78
VTH1P40438 YOR309CYOR309C 381 nt-2.29□□□□□ -2.78
VTH1P40438 Q0142Q0142 177 nt-2.32□□□□□ -2.78
VTH1P40438 YIR021W-AYIR021W-A 213 nt-2.33□□□□□ -2.78
VTH1P40438 CSN9YDR179C 489 nt-2.34□□□□□ -2.78
VTH1P40438 EAF6YJR082C 342 nt-2.34□□□□□ -2.78
VTH1P40438 YOR072W-BYOR072W-B 162 nt-2.34□□□□□ -2.78
VTH1P40438 YMR172C-AYMR172C-A 384 nt-2.36□□□□□ -2.79
VTH1P40438 MPC1YGL080W 393 nt-2.42□□□□□ -2.8
VTH1P40438 YBR182C-AYBR182C-A 195 nt-2.42□□□□□ -2.8
VTH1P40438 tD(GUC)QtD(GUC)Q 75 nt-2.43□□□□□ -2.8
VTH1P40438 YER097WYER097W 330 nt-2.44□□□□□ -2.8
VTH1P40438 YLR286W-AYLR286W-A 135 nt-2.44□□□□□ -2.8
VTH1P40438 YDL158CYDL158C 309 nt-2.45□□□□□ -2.8
VTH1P40438 YGR146C-AYGR146C-A 162 nt-2.48□□□□□ -2.81
VTH1P40438 YFL032WYFL032W 321 nt-2.5□□□□□ -2.81
VTH1P40438 YOR376W-AYOR376W-A 156 nt-2.5□□□□□ -2.81
VTH1P40438 YLR342W-AYLR342W-A 174 nt-2.52□□□□□ -2.81
VTH1P40438 YFL019CYFL019C 354 nt-2.52□□□□□ -2.81
VTH1P40438 YOL083C-AYOL083C-A 141 nt-2.52□□□□□ -2.81
VTH1P40438 YKL063CYKL063C 504 nt-2.53□□□□□ -2.81
VTH1P40438 YDL159C-BYDL159C-B 177 nt-2.55□□□□□ -2.82
VTH1P40438 snR54snR54 86 nt-2.56□□□□□ -2.82
VTH1P40438 YDR524W-CYDR524W-C 90 nt-2.58□□□□□ -2.82
VTH1P40438 tM(CAU)Q2tM(CAU)Q2 78 nt-2.59□□□□□ -2.82
VTH1P40438 YBR196C-AYBR196C-A 150 nt-2.63□□□□□ -2.83
VTH1P40438 snR60snR60 104 nt-2.64□□□□□ -2.83
VTH1P40438 YLR412C-AYLR412C-A 207 nt-2.64□□□□□ -2.83
VTH1P40438 ATP19YOL077W-A 207 nt-2.64□□□□□ -2.83
VTH1P40438 YBR178WYBR178W 375 nt-2.65□□□□□ -2.83
VTH1P40438 YOR316C-AYOR316C-A 210 nt-2.68□□□□□ -2.84
VTH1P40438 YER006C-AYER006C-A 318 nt-2.68□□□□□ -2.84
VTH1P40438 YJR157WYJR157W 363 nt-2.68□□□□□ -2.84
VTH1P40438 YOR381W-AYOR381W-A 168 nt-2.68□□□□□ -2.84
VTH1P40438 YNL324WYNL324W 396 nt-2.69□□□□□ -2.84
VTH1P40438 ATP6Q0085 780 nt-2.71□□□□□ -2.84
VTH1P40438 YLR406C-AYLR406C-A 150 nt-2.72□□□□□ -2.84
VTH1P40438 YNL028WYNL028W 318 nt-2.72□□□□□ -2.84
Retrieved 100 of 7,029 protein–RNA pairs in 82.2 ms