Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.99■□□□□ 0.63
RORAP35398 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RORAP35398 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RORAP35398 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.99■□□□□ 0.63
RORAP35398 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.99■□□□□ 0.63
RORAP35398 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.99■□□□□ 0.63
RORAP35398 AC110285.5-201ENST00000611501 352 ntBASIC18.99■□□□□ 0.63
RORAP35398 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.99■□□□□ 0.63
RORAP35398 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RORAP35398 PTBP1P-201ENST00000554374 1601 ntBASIC18.99■□□□□ 0.63
RORAP35398 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.99■□□□□ 0.63
RORAP35398 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.98■□□□□ 0.63
RORAP35398 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RORAP35398 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RORAP35398 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RORAP35398 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RORAP35398 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RORAP35398 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RORAP35398 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.98■□□□□ 0.63
RORAP35398 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.98■□□□□ 0.63
RORAP35398 MIR4497-201ENST00000583208 89 ntBASIC18.98■□□□□ 0.63
RORAP35398 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RORAP35398 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RORAP35398 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RORAP35398 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RORAP35398 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RORAP35398 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.97■□□□□ 0.63
RORAP35398 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RORAP35398 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.97■□□□□ 0.63
RORAP35398 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.97■□□□□ 0.63
RORAP35398 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RORAP35398 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 AC012618.2-201ENST00000428058 849 ntBASIC18.97■□□□□ 0.63
RORAP35398 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.97■□□□□ 0.63
RORAP35398 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.97■□□□□ 0.63
RORAP35398 AL121829.2-201ENST00000620908 328 ntBASIC18.97■□□□□ 0.63
RORAP35398 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.97■□□□□ 0.63
RORAP35398 AC007225.1-201ENST00000566331 1836 ntBASIC18.97■□□□□ 0.63
RORAP35398 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RORAP35398 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RORAP35398 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RORAP35398 FP700111.2-201ENST00000619190 1892 ntBASIC18.97■□□□□ 0.63
RORAP35398 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RORAP35398 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.96■□□□□ 0.63
RORAP35398 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.96■□□□□ 0.63
RORAP35398 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.96■□□□□ 0.63
RORAP35398 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.96■□□□□ 0.63
RORAP35398 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RORAP35398 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
RORAP35398 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.96■□□□□ 0.63
RORAP35398 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.96■□□□□ 0.63
RORAP35398 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.96■□□□□ 0.63
RORAP35398 AC233702.5-201ENST00000584107 538 ntBASIC18.96■□□□□ 0.63
RORAP35398 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.96■□□□□ 0.63
RORAP35398 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RORAP35398 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RORAP35398 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RORAP35398 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RORAP35398 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.95■□□□□ 0.62
RORAP35398 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.95■□□□□ 0.62
RORAP35398 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.95■□□□□ 0.62
RORAP35398 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 RPS2P55-201ENST00000397318 883 ntBASIC18.95■□□□□ 0.62
RORAP35398 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.95■□□□□ 0.62
RORAP35398 AC107956.1-201ENST00000494359 873 ntBASIC18.95■□□□□ 0.62
RORAP35398 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 PRKY-204ENST00000533551 1019 ntBASIC18.95■□□□□ 0.62
RORAP35398 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.95■□□□□ 0.62
RORAP35398 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RORAP35398 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.95■□□□□ 0.62
RORAP35398 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.95■□□□□ 0.62
RORAP35398 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RORAP35398 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms