Protein–RNA interactions for Protein: P29704

ERG9, Squalene synthase, yeastyeast

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ERG9P29704 AI1Q0050 2505 nt0.41□□□□□ -2.34
ERG9P29704 YOR015WYOR015W 360 nt0.41□□□□□ -2.34
ERG9P29704 FMP27YLR454W 7887 nt0.41□□□□□ -2.34
ERG9P29704 MYO1YHR023W 5787 nt0.4□□□□□ -2.35
ERG9P29704 YGL123C-AYGL123C-A 231 nt0.39□□□□□ -2.35
ERG9P29704 STE5YDR103W 2754 nt0.39□□□□□ -2.35
ERG9P29704 BEM3YPL115C 3387 nt0.38□□□□□ -2.35
ERG9P29704 YCR022CYCR022C 345 nt0.37□□□□□ -2.35
ERG9P29704 RPL39YJL189W 156 nt0.37□□□□□ -2.35
ERG9P29704 YLR120W-AYLR120W-A 102 nt0.37□□□□□ -2.35
ERG9P29704 YOR072W-BYOR072W-B 162 nt0.37□□□□□ -2.35
ERG9P29704 RAD61YDR014W 1944 nt0.36□□□□□ -2.35
ERG9P29704 YGR069WYGR069W 336 nt0.36□□□□□ -2.35
ERG9P29704 BLI1YKL061W 342 nt0.36□□□□□ -2.35
ERG9P29704 IQG1YPL242C 4488 nt0.36□□□□□ -2.35
ERG9P29704 NNF2YGR089W 2811 nt0.35□□□□□ -2.35
ERG9P29704 BIR1YJR089W 2865 nt0.34□□□□□ -2.35
ERG9P29704 ABF2YMR072W 552 nt0.34□□□□□ -2.36
ERG9P29704 MLP1YKR095W 5628 nt0.32□□□□□ -2.36
ERG9P29704 snR74snR74 88 nt0.32□□□□□ -2.36
ERG9P29704 YDR371C-AYDR371C-A 105 nt0.32□□□□□ -2.36
ERG9P29704 MLP2YIL149C 5040 nt0.31□□□□□ -2.36
ERG9P29704 ORC3YLL004W 1851 nt0.31□□□□□ -2.36
ERG9P29704 YGL052WYGL052W 306 nt0.31□□□□□ -2.36
ERG9P29704 RPS26AYGL189C 360 nt0.31□□□□□ -2.36
ERG9P29704 YKL100W-AYKL100W-A 90 nt0.31□□□□□ -2.36
ERG9P29704 YLR041WYLR041W 321 nt0.3□□□□□ -2.36
ERG9P29704 YMR172C-AYMR172C-A 384 nt0.3□□□□□ -2.36
ERG9P29704 YER053C-AYER053C-A 114 nt0.29□□□□□ -2.36
ERG9P29704 COX12YLR038C 252 nt0.29□□□□□ -2.36
ERG9P29704 YHR131W-AYHR131W-A 246 nt0.28□□□□□ -2.36
ERG9P29704 YDR366CYDR366C 399 nt0.27□□□□□ -2.37
ERG9P29704 YNL146WYNL146W 303 nt0.27□□□□□ -2.37
ERG9P29704 YOR008C-AYOR008C-A 225 nt0.27□□□□□ -2.37
ERG9P29704 ESP1YGR098C 4893 nt0.27□□□□□ -2.37
ERG9P29704 NIP1YMR309C 2439 nt0.26□□□□□ -2.37
ERG9P29704 SNU13YEL026W 381 nt0.26□□□□□ -2.37
ERG9P29704 YER078W-AYER078W-A 165 nt0.26□□□□□ -2.37
ERG9P29704 YLL006W-AYLL006W-A 177 nt0.26□□□□□ -2.37
ERG9P29704 YNL277W-AYNL277W-A 189 nt0.25□□□□□ -2.37
ERG9P29704 YCR038W-AYCR038W-A 126 nt0.24□□□□□ -2.37
ERG9P29704 YDR524W-CYDR524W-C 90 nt0.24□□□□□ -2.37
ERG9P29704 RCO1YMR075W 2055 nt0.22□□□□□ -2.37
ERG9P29704 YPR010C-AYPR010C-A 219 nt0.21□□□□□ -2.38
ERG9P29704 YIL002W-AYIL002W-A 210 nt0.2□□□□□ -2.38
ERG9P29704 BUL2YML111W 2763 nt0.2□□□□□ -2.38
ERG9P29704 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
ERG9P29704 YIR030W-AYIR030W-A 384 nt0.17□□□□□ -2.38
ERG9P29704 YBR072C-AYBR072C-A 162 nt0.17□□□□□ -2.38
ERG9P29704 THO2YNL139C 4794 nt0.17□□□□□ -2.38
ERG9P29704 UTP8YGR128C 2142 nt0.16□□□□□ -2.38
ERG9P29704 YNL054W-BYNL054W-B 5250 nt0.15□□□□□ -2.39
ERG9P29704 YEL073CYEL073C 324 nt0.15□□□□□ -2.39
ERG9P29704 snR65snR65 100 nt0.13□□□□□ -2.39
ERG9P29704 APQ12YIL040W 417 nt0.13□□□□□ -2.39
ERG9P29704 YLR232WYLR232W 348 nt0.13□□□□□ -2.39
ERG9P29704 YBL100W-BYBL100W-B 5313 nt0.13□□□□□ -2.39
ERG9P29704 YKU70YMR284W 1809 nt0.13□□□□□ -2.39
ERG9P29704 YOR186C-AYOR186C-A 210 nt0.12□□□□□ -2.39
ERG9P29704 YBR182C-AYBR182C-A 195 nt0.12□□□□□ -2.39
ERG9P29704 tF(GAA)QtF(GAA)Q 75 nt0.11□□□□□ -2.39
ERG9P29704 YMR158W-BYMR158W-B 321 nt0.09□□□□□ -2.4
ERG9P29704 snR55snR55 98 nt0.08□□□□□ -2.4
ERG9P29704 TAH1YCR060W 336 nt0.08□□□□□ -2.4
ERG9P29704 YDR544CYDR544C 429 nt0.08□□□□□ -2.4
ERG9P29704 SDH6YDR379C-A 240 nt0.07□□□□□ -2.4
ERG9P29704 YGL041CYGL041C 204 nt0.07□□□□□ -2.4
ERG9P29704 snR49snR49 165 nt0.07□□□□□ -2.4
ERG9P29704 CSE1YGL238W 2883 nt0.07□□□□□ -2.4
ERG9P29704 PRP39YML046W 1890 nt0.06□□□□□ -2.4
ERG9P29704 GLG1YKR058W 1851 nt0.05□□□□□ -2.4
ERG9P29704 YPL152W-AYPL152W-A 99 nt0.04□□□□□ -2.4
ERG9P29704 YBR131C-AYBR131C-A 90 nt0.04□□□□□ -2.4
ERG9P29704 YER181CYER181C 324 nt0.03□□□□□ -2.4
ERG9P29704 snR45snR45 172 nt0.03□□□□□ -2.4
ERG9P29704 YML099W-AYML099W-A 330 nt0.02□□□□□ -2.41
ERG9P29704 SOV1YMR066W 2697 nt0□□□□□ -2.41
ERG9P29704 YBL039C-AYBL039C-A 84 nt0□□□□□ -2.41
ERG9P29704 YOL155W-AYOL155W-A 135 nt0□□□□□ -2.41
ERG9P29704 YOR231C-AYOR231C-A 201 nt-0.01□□□□□ -2.41
ERG9P29704 COG6YNL041C 2520 nt-0.02□□□□□ -2.41
ERG9P29704 YBR099CYBR099C 384 nt-0.03□□□□□ -2.41
ERG9P29704 YEL014CYEL014C 306 nt-0.04□□□□□ -2.42
ERG9P29704 YGL182CYGL182C 324 nt-0.06□□□□□ -2.42
ERG9P29704 YJL182CYJL182C 318 nt-0.07□□□□□ -2.42
ERG9P29704 EST1YLR233C 2100 nt-0.08□□□□□ -2.42
ERG9P29704 YGL188C-AYGL188C-A 141 nt-0.09□□□□□ -2.42
ERG9P29704 Q0142Q0142 177 nt-0.09□□□□□ -2.42
ERG9P29704 snR128snR128 126 nt-0.09□□□□□ -2.42
ERG9P29704 YOR302WYOR302W 78 nt-0.09□□□□□ -2.42
ERG9P29704 YOR314W-AYOR314W-A 111 nt-0.1□□□□□ -2.43
ERG9P29704 YNL097C-BYNL097C-B 123 nt-0.11□□□□□ -2.43
ERG9P29704 snR8snR8 190 nt-0.16□□□□□ -2.44
ERG9P29704 YOR381W-AYOR381W-A 168 nt-0.16□□□□□ -2.44
ERG9P29704 YDR210WYDR210W 228 nt-0.18□□□□□ -2.44
ERG9P29704 snR80snR80 171 nt-0.19□□□□□ -2.44
ERG9P29704 TFB5YDR079C-A 219 nt-0.19□□□□□ -2.44
ERG9P29704 YOR170WYOR170W 306 nt-0.22□□□□□ -2.44
ERG9P29704 tM(CAU)Q2tM(CAU)Q2 78 nt-0.24□□□□□ -2.45
ERG9P29704 YGR164WYGR164W 336 nt-0.27□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms