Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.68■□□□□ 0.74
LAMA1P25391 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMA1P25391 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LAMA1P25391 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
LAMA1P25391 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 AL137013.1-201ENST00000432946 1228 ntBASIC19.67■□□□□ 0.74
LAMA1P25391 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.67■□□□□ 0.74
LAMA1P25391 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.67■□□□□ 0.74
LAMA1P25391 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.67■□□□□ 0.74
LAMA1P25391 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMA1P25391 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LAMA1P25391 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.67■□□□□ 0.74
LAMA1P25391 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.67■□□□□ 0.74
LAMA1P25391 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.67■□□□□ 0.74
LAMA1P25391 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
LAMA1P25391 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMA1P25391 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
LAMA1P25391 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMA1P25391 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMA1P25391 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LAMA1P25391 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.67■□□□□ 0.74
LAMA1P25391 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LAMA1P25391 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
LAMA1P25391 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.66■□□□□ 0.74
LAMA1P25391 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMA1P25391 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMA1P25391 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMA1P25391 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.66■□□□□ 0.74
LAMA1P25391 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
LAMA1P25391 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.66■□□□□ 0.74
LAMA1P25391 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMA1P25391 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMA1P25391 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.66■□□□□ 0.74
LAMA1P25391 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMA1P25391 TSPY14P-201ENST00000303979 915 ntBASIC19.66■□□□□ 0.74
LAMA1P25391 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LAMA1P25391 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.66■□□□□ 0.74
LAMA1P25391 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.66■□□□□ 0.74
LAMA1P25391 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMA1P25391 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMA1P25391 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.65■□□□□ 0.74
LAMA1P25391 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.65■□□□□ 0.74
LAMA1P25391 AC023632.3-201ENST00000521633 145 ntBASIC19.65■□□□□ 0.74
LAMA1P25391 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.65■□□□□ 0.74
LAMA1P25391 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
LAMA1P25391 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
LAMA1P25391 AL031985.4-201ENST00000642138 673 ntBASIC19.65■□□□□ 0.74
LAMA1P25391 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.65■□□□□ 0.74
LAMA1P25391 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 KSR1P1-201ENST00000446298 240 ntBASIC19.65■□□□□ 0.74
LAMA1P25391 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMA1P25391 KRT8P36-201ENST00000489121 1440 ntBASIC19.64■□□□□ 0.74
LAMA1P25391 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
LAMA1P25391 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LAMA1P25391 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
LAMA1P25391 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.64■□□□□ 0.73
LAMA1P25391 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LAMA1P25391 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
LAMA1P25391 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.64■□□□□ 0.73
LAMA1P25391 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LAMA1P25391 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.64■□□□□ 0.73
LAMA1P25391 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.64■□□□□ 0.73
LAMA1P25391 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LAMA1P25391 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.64■□□□□ 0.73
LAMA1P25391 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LAMA1P25391 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.64■□□□□ 0.73
LAMA1P25391 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LAMA1P25391 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms