Protein–RNA interactions for Protein: P22434

PDE1, 3',5'-cyclic-nucleotide phosphodiesterase 1, yeastyeast

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDE1P22434 BFR2YDR299W 1605 nt1.15□□□□□ -2.22
PDE1P22434 PRP42YDR235W 1635 nt1.15□□□□□ -2.23
PDE1P22434 YKL100W-AYKL100W-A 90 nt1.14□□□□□ -2.23
PDE1P22434 YOR381W-AYOR381W-A 168 nt1.14□□□□□ -2.23
PDE1P22434 YML002WYML002W 2214 nt1.13□□□□□ -2.23
PDE1P22434 YIL020C-AYIL020C-A 339 nt1.12□□□□□ -2.23
PDE1P22434 YLR041WYLR041W 321 nt1.12□□□□□ -2.23
PDE1P22434 PRP16YKR086W 3216 nt1.12□□□□□ -2.23
PDE1P22434 RAD9YDR217C 3930 nt1.11□□□□□ -2.23
PDE1P22434 PRP5YBR237W 2550 nt1.1□□□□□ -2.23
PDE1P22434 FYV10YIL097W 1551 nt1.1□□□□□ -2.23
PDE1P22434 NST1YNL091W 3723 nt1.1□□□□□ -2.23
PDE1P22434 BUD3YCL014W 4911 nt1.09□□□□□ -2.24
PDE1P22434 SEC8YPR055W 3198 nt1.08□□□□□ -2.24
PDE1P22434 SPT7YBR081C 3999 nt1.07□□□□□ -2.24
PDE1P22434 UTP8YGR128C 2142 nt1.06□□□□□ -2.24
PDE1P22434 YPR160W-AYPR160W-A 81 nt1.06□□□□□ -2.24
PDE1P22434 QCR9YGR183C 201 nt1.05□□□□□ -2.24
PDE1P22434 YDL073WYDL073W 2955 nt1.05□□□□□ -2.24
PDE1P22434 tF(GAA)BtF(GAA)B 73 nt1.04□□□□□ -2.24
PDE1P22434 tF(GAA)FtF(GAA)F 73 nt1.04□□□□□ -2.24
PDE1P22434 tF(GAA)GtF(GAA)G 73 nt1.04□□□□□ -2.24
PDE1P22434 tF(GAA)H1tF(GAA)H1 73 nt1.04□□□□□ -2.24
PDE1P22434 tF(GAA)H2tF(GAA)H2 73 nt1.04□□□□□ -2.24
PDE1P22434 tF(GAA)MtF(GAA)M 73 nt1.04□□□□□ -2.24
PDE1P22434 tF(GAA)P1tF(GAA)P1 73 nt1.04□□□□□ -2.24
PDE1P22434 tF(GAA)P2tF(GAA)P2 73 nt1.04□□□□□ -2.24
PDE1P22434 YGL182CYGL182C 324 nt1.03□□□□□ -2.24
PDE1P22434 tN(GUU)QtN(GUU)Q 71 nt1.03□□□□□ -2.24
PDE1P22434 YLR399W-AYLR399W-A 105 nt1.03□□□□□ -2.24
PDE1P22434 YBL039C-AYBL039C-A 84 nt1.03□□□□□ -2.24
PDE1P22434 YBL053WYBL053W 375 nt1.03□□□□□ -2.24
PDE1P22434 TAH1YCR060W 336 nt1.02□□□□□ -2.25
PDE1P22434 RKR1YMR247C 4689 nt1.01□□□□□ -2.25
PDE1P22434 YJR029WYJR029W 5268 nt1□□□□□ -2.25
PDE1P22434 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
PDE1P22434 YDL007C-AYDL007C-A 258 nt0.98□□□□□ -2.25
PDE1P22434 YHR131W-AYHR131W-A 246 nt0.98□□□□□ -2.25
PDE1P22434 YLR232WYLR232W 348 nt0.97□□□□□ -2.25
PDE1P22434 YOR102WYOR102W 351 nt0.97□□□□□ -2.25
PDE1P22434 snR48snR48 113 nt0.97□□□□□ -2.25
PDE1P22434 CHS6YJL099W 2241 nt0.96□□□□□ -2.26
PDE1P22434 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
PDE1P22434 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
PDE1P22434 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
PDE1P22434 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
PDE1P22434 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
PDE1P22434 YOR170WYOR170W 306 nt0.96□□□□□ -2.26
PDE1P22434 YHL015W-AYHL015W-A 84 nt0.95□□□□□ -2.26
PDE1P22434 SNU13YEL026W 381 nt0.94□□□□□ -2.26
PDE1P22434 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
PDE1P22434 VAM6YDL077C 3150 nt0.94□□□□□ -2.26
PDE1P22434 SCC2YDR180W 4482 nt0.93□□□□□ -2.26
PDE1P22434 OST4YDL232W 111 nt0.93□□□□□ -2.26
PDE1P22434 YDR544CYDR544C 429 nt0.92□□□□□ -2.26
PDE1P22434 tL(UAA)QtL(UAA)Q 85 nt0.92□□□□□ -2.26
PDE1P22434 UBP3YER151C 2739 nt0.91□□□□□ -2.26
PDE1P22434 YIL142C-AYIL142C-A 333 nt0.89□□□□□ -2.27
PDE1P22434 YSP1YHR155W 3687 nt0.88□□□□□ -2.27
PDE1P22434 YOL014WYOL014W 375 nt0.88□□□□□ -2.27
PDE1P22434 YOR329W-AYOR329W-A 210 nt0.88□□□□□ -2.27
PDE1P22434 YOR314W-AYOR314W-A 111 nt0.87□□□□□ -2.27
PDE1P22434 BEM2YER155C 6504 nt0.86□□□□□ -2.27
PDE1P22434 BEM3YPL115C 3387 nt0.85□□□□□ -2.27
PDE1P22434 snR39BsnR39B 96 nt0.85□□□□□ -2.27
PDE1P22434 YGR164WYGR164W 336 nt0.84□□□□□ -2.27
PDE1P22434 YKL145W-AYKL145W-A 93 nt0.84□□□□□ -2.27
PDE1P22434 COG6YNL041C 2520 nt0.84□□□□□ -2.28
PDE1P22434 YJL127W-AYJL127W-A 117 nt0.83□□□□□ -2.28
PDE1P22434 ATP8Q0080 147 nt0.82□□□□□ -2.28
PDE1P22434 MYO1YHR023W 5787 nt0.82□□□□□ -2.28
PDE1P22434 SEC1YDR164C 2175 nt0.81□□□□□ -2.28
PDE1P22434 YMR160WYMR160W 2451 nt0.81□□□□□ -2.28
PDE1P22434 SDH6YDR379C-A 240 nt0.81□□□□□ -2.28
PDE1P22434 DOP1YDR141C 5097 nt0.8□□□□□ -2.28
PDE1P22434 Q0092Q0092 141 nt0.8□□□□□ -2.28
PDE1P22434 YBR072C-AYBR072C-A 162 nt0.8□□□□□ -2.28
PDE1P22434 UTP20YBL004W 7482 nt0.79□□□□□ -2.28
PDE1P22434 YNL170WYNL170W 396 nt0.79□□□□□ -2.28
PDE1P22434 RPM2YML091C 3609 nt0.79□□□□□ -2.28
PDE1P22434 YOR192C-BYOR192C-B 5313 nt0.79□□□□□ -2.28
PDE1P22434 NNF2YGR089W 2811 nt0.78□□□□□ -2.28
PDE1P22434 tM(CAU)Q2tM(CAU)Q2 78 nt0.78□□□□□ -2.28
PDE1P22434 ULP2YIL031W 3105 nt0.78□□□□□ -2.28
PDE1P22434 YDR210WYDR210W 228 nt0.77□□□□□ -2.29
PDE1P22434 YLL006W-AYLL006W-A 177 nt0.77□□□□□ -2.29
PDE1P22434 YNL067W-BYNL067W-B 141 nt0.77□□□□□ -2.29
PDE1P22434 LTE1YAL024C 4308 nt0.76□□□□□ -2.29
PDE1P22434 BUL2YML111W 2763 nt0.75□□□□□ -2.29
PDE1P22434 GLG1YKR058W 1851 nt0.75□□□□□ -2.29
PDE1P22434 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
PDE1P22434 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
PDE1P22434 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
PDE1P22434 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
PDE1P22434 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
PDE1P22434 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
PDE1P22434 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
PDE1P22434 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
PDE1P22434 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
PDE1P22434 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms