Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 AL138781.1-201ENST00000566567 1274 ntBASIC20.17■□□□□ 0.82
HLA-DPA1P20036 AC142086.2-201ENST00000569753 217 ntBASIC20.17■□□□□ 0.82
HLA-DPA1P20036 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 MYC-209ENST00000641252 345 ntBASIC20.17■□□□□ 0.82
HLA-DPA1P20036 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 KRT16P6-202ENST00000425692 1426 ntBASIC20.17■□□□□ 0.82
HLA-DPA1P20036 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DPA1P20036 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 AC097658.1-201ENST00000475555 843 ntBASIC20.16■□□□□ 0.82
HLA-DPA1P20036 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DPA1P20036 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 AC133041.1-202ENST00000642053 222 ntBASIC20.15■□□□□ 0.82
HLA-DPA1P20036 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DPA1P20036 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
HLA-DPA1P20036 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HLA-DPA1P20036 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.14■□□□□ 0.82
HLA-DPA1P20036 AC112907.3-201ENST00000577781 2400 ntBASIC20.14■□□□□ 0.82
HLA-DPA1P20036 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DPA1P20036 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
HLA-DPA1P20036 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HLA-DPA1P20036 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DPA1P20036 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.14■□□□□ 0.81
HLA-DPA1P20036 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms