Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.35■□□□□ 0.85
SRFP11831 AC011506.1-201ENST00000474329 610 ntBASIC20.35■□□□□ 0.85
SRFP11831 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.35■□□□□ 0.85
SRFP11831 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRFP11831 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRFP11831 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SRFP11831 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRFP11831 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRFP11831 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.35■□□□□ 0.85
SRFP11831 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFP11831 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFP11831 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
SRFP11831 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.34■□□□□ 0.85
SRFP11831 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SRFP11831 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.34■□□□□ 0.85
SRFP11831 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRFP11831 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRFP11831 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.34■□□□□ 0.85
SRFP11831 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SRFP11831 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRFP11831 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFP11831 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRFP11831 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SRFP11831 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
SRFP11831 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.33■□□□□ 0.85
SRFP11831 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.33■□□□□ 0.85
SRFP11831 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
SRFP11831 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRFP11831 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SRFP11831 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SRFP11831 AC004980.1-204ENST00000429707 299 ntBASIC20.33■□□□□ 0.85
SRFP11831 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.33■□□□□ 0.85
SRFP11831 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.33■□□□□ 0.85
SRFP11831 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SRFP11831 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.33■□□□□ 0.85
SRFP11831 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.33■□□□□ 0.85
SRFP11831 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SRFP11831 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SRFP11831 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRFP11831 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SRFP11831 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRFP11831 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.33■□□□□ 0.84
SRFP11831 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRFP11831 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRFP11831 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRFP11831 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.33■□□□□ 0.84
SRFP11831 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.33■□□□□ 0.84
SRFP11831 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRFP11831 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRFP11831 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.32■□□□□ 0.84
SRFP11831 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFP11831 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFP11831 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFP11831 FAM8A6P-201ENST00000407496 1135 ntBASIC20.32■□□□□ 0.84
SRFP11831 HMGA1P5-201ENST00000412453 271 ntBASIC20.32■□□□□ 0.84
SRFP11831 AC117947.1-201ENST00000427448 529 ntBASIC20.32■□□□□ 0.84
SRFP11831 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.32■□□□□ 0.84
SRFP11831 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.32■□□□□ 0.84
SRFP11831 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.32■□□□□ 0.84
SRFP11831 AC131212.4-201ENST00000623606 975 ntBASIC20.32■□□□□ 0.84
SRFP11831 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.32■□□□□ 0.84
SRFP11831 MYC-208ENST00000641036 567 ntBASIC20.32■□□□□ 0.84
SRFP11831 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFP11831 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFP11831 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFP11831 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SRFP11831 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFP11831 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRFP11831 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRFP11831 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRFP11831 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.31■□□□□ 0.84
SRFP11831 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRFP11831 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
SRFP11831 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRFP11831 KRT8P17-201ENST00000453110 1448 ntBASIC20.31■□□□□ 0.84
SRFP11831 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRFP11831 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.31■□□□□ 0.84
SRFP11831 INGX-201ENST00000359239 846 ntBASIC20.31■□□□□ 0.84
SRFP11831 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRFP11831 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRFP11831 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.31■□□□□ 0.84
SRFP11831 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.31■□□□□ 0.84
SRFP11831 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
SRFP11831 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRFP11831 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRFP11831 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.3■□□□□ 0.84
SRFP11831 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.3■□□□□ 0.84
SRFP11831 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.3■□□□□ 0.84
SRFP11831 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.3■□□□□ 0.84
SRFP11831 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.3■□□□□ 0.84
SRFP11831 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.3■□□□□ 0.84
SRFP11831 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRFP11831 GUSBP5-202ENST00000510805 1989 ntBASIC20.3■□□□□ 0.84
SRFP11831 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SRFP11831 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFP11831 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.29■□□□□ 0.84
SRFP11831 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SRFP11831 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFP11831 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFP11831 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms