Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 snR46snR46 197 nt0.91□□□□□ -2.26
TY2A-FP0CX61 PRP42YDR235W 1635 nt0.9□□□□□ -2.26
TY2A-FP0CX61 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
TY2A-FP0CX61 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
TY2A-FP0CX61 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
TY2A-FP0CX61 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
TY2A-FP0CX61 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
TY2A-FP0CX61 UBP3YER151C 2739 nt0.89□□□□□ -2.27
TY2A-FP0CX61 PRP5YBR237W 2550 nt0.89□□□□□ -2.27
TY2A-FP0CX61 RKR1YMR247C 4689 nt0.89□□□□□ -2.27
TY2A-FP0CX61 CHS6YJL099W 2241 nt0.89□□□□□ -2.27
TY2A-FP0CX61 YJL182CYJL182C 318 nt0.88□□□□□ -2.27
TY2A-FP0CX61 snR52snR52 92 nt0.88□□□□□ -2.27
TY2A-FP0CX61 TRS65YGR166W 1683 nt0.87□□□□□ -2.27
TY2A-FP0CX61 DOP1YDR141C 5097 nt0.87□□□□□ -2.27
TY2A-FP0CX61 tN(GUU)QtN(GUU)Q 71 nt0.86□□□□□ -2.27
TY2A-FP0CX61 YLR342W-AYLR342W-A 174 nt0.86□□□□□ -2.27
TY2A-FP0CX61 YEL073CYEL073C 324 nt0.85□□□□□ -2.27
TY2A-FP0CX61 PRP39YML046W 1890 nt0.85□□□□□ -2.27
TY2A-FP0CX61 PAU24YBR301W 363 nt0.85□□□□□ -2.27
TY2A-FP0CX61 OST4YDL232W 111 nt0.84□□□□□ -2.27
TY2A-FP0CX61 YHR131W-AYHR131W-A 246 nt0.84□□□□□ -2.27
TY2A-FP0CX61 LTE1YAL024C 4308 nt0.83□□□□□ -2.28
TY2A-FP0CX61 YSP1YHR155W 3687 nt0.83□□□□□ -2.28
TY2A-FP0CX61 SEC1YDR164C 2175 nt0.82□□□□□ -2.28
TY2A-FP0CX61 YNL337WYNL337W 255 nt0.82□□□□□ -2.28
TY2A-FP0CX61 SNU13YEL026W 381 nt0.81□□□□□ -2.28
TY2A-FP0CX61 YLR232WYLR232W 348 nt0.81□□□□□ -2.28
TY2A-FP0CX61 MYO1YHR023W 5787 nt0.8□□□□□ -2.28
TY2A-FP0CX61 BEM3YPL115C 3387 nt0.8□□□□□ -2.28
TY2A-FP0CX61 TAH1YCR060W 336 nt0.79□□□□□ -2.28
TY2A-FP0CX61 YJL127W-AYJL127W-A 117 nt0.79□□□□□ -2.28
TY2A-FP0CX61 YJL150WYJL150W 303 nt0.79□□□□□ -2.28
TY2A-FP0CX61 STF2YGR008C 255 nt0.78□□□□□ -2.28
TY2A-FP0CX61 YGL182CYGL182C 324 nt0.76□□□□□ -2.29
TY2A-FP0CX61 YIL142C-AYIL142C-A 333 nt0.76□□□□□ -2.29
TY2A-FP0CX61 HUG1YML058W-A 207 nt0.76□□□□□ -2.29
TY2A-FP0CX61 YBL039C-AYBL039C-A 84 nt0.76□□□□□ -2.29
TY2A-FP0CX61 BUD3YCL014W 4911 nt0.76□□□□□ -2.29
TY2A-FP0CX61 YOR381W-AYOR381W-A 168 nt0.73□□□□□ -2.29
TY2A-FP0CX61 YLR466C-BYLR466C-B 117 nt0.71□□□□□ -2.3
TY2A-FP0CX61 NNF2YGR089W 2811 nt0.71□□□□□ -2.3
TY2A-FP0CX61 PET111YMR257C 2403 nt0.7□□□□□ -2.3
TY2A-FP0CX61 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
TY2A-FP0CX61 RPM2YML091C 3609 nt0.7□□□□□ -2.3
TY2A-FP0CX61 YNL198CYNL198C 303 nt0.68□□□□□ -2.3
TY2A-FP0CX61 YOR170WYOR170W 306 nt0.68□□□□□ -2.3
TY2A-FP0CX61 ULP2YIL031W 3105 nt0.67□□□□□ -2.3
TY2A-FP0CX61 YDR544CYDR544C 429 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)BtT(AGU)B 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)CtT(AGU)C 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)DtT(AGU)D 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)HtT(AGU)H 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)I1tT(AGU)I1 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)I2tT(AGU)I2 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)JtT(AGU)J 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)N1tT(AGU)N1 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)N2tT(AGU)N2 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)O1tT(AGU)O1 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 tT(AGU)O2tT(AGU)O2 73 nt0.67□□□□□ -2.3
TY2A-FP0CX61 YLL006W-AYLL006W-A 177 nt0.67□□□□□ -2.3
TY2A-FP0CX61 YBR072C-AYBR072C-A 162 nt0.67□□□□□ -2.3
TY2A-FP0CX61 YGR151CYGR151C 336 nt0.66□□□□□ -2.3
TY2A-FP0CX61 YOR192C-BYOR192C-B 5313 nt0.65□□□□□ -2.3
TY2A-FP0CX61 MLP1YKR095W 5628 nt0.65□□□□□ -2.3
TY2A-FP0CX61 Q0032Q0032 291 nt0.64□□□□□ -2.31
TY2A-FP0CX61 PAU12YGR294W 363 nt0.64□□□□□ -2.31
TY2A-FP0CX61 GLG1YKR058W 1851 nt0.63□□□□□ -2.31
TY2A-FP0CX61 COG6YNL041C 2520 nt0.63□□□□□ -2.31
TY2A-FP0CX61 YOR314W-AYOR314W-A 111 nt0.62□□□□□ -2.31
TY2A-FP0CX61 snR48snR48 113 nt0.62□□□□□ -2.31
TY2A-FP0CX61 YMR160WYMR160W 2451 nt0.62□□□□□ -2.31
TY2A-FP0CX61 NIP1YMR309C 2439 nt0.62□□□□□ -2.31
TY2A-FP0CX61 SDH6YDR379C-A 240 nt0.61□□□□□ -2.31
TY2A-FP0CX61 YGL007C-AYGL007C-A 87 nt0.6□□□□□ -2.31
TY2A-FP0CX61 RPS26AYGL189C 360 nt0.6□□□□□ -2.31
TY2A-FP0CX61 UTP20YBL004W 7482 nt0.6□□□□□ -2.31
TY2A-FP0CX61 YDR371C-AYDR371C-A 105 nt0.59□□□□□ -2.31
TY2A-FP0CX61 YHL015W-AYHL015W-A 84 nt0.59□□□□□ -2.31
TY2A-FP0CX61 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
TY2A-FP0CX61 YOR102WYOR102W 351 nt0.58□□□□□ -2.32
TY2A-FP0CX61 BUL2YML111W 2763 nt0.57□□□□□ -2.32
TY2A-FP0CX61 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
TY2A-FP0CX61 tM(CAU)Q2tM(CAU)Q2 78 nt0.56□□□□□ -2.32
TY2A-FP0CX61 SBH1YER087C-B 249 nt0.55□□□□□ -2.32
TY2A-FP0CX61 IQG1YPL242C 4488 nt0.54□□□□□ -2.32
TY2A-FP0CX61 YNL338WYNL338W 159 nt0.54□□□□□ -2.32
TY2A-FP0CX61 YOR329W-AYOR329W-A 210 nt0.54□□□□□ -2.32
TY2A-FP0CX61 YDR210WYDR210W 228 nt0.52□□□□□ -2.33
TY2A-FP0CX61 CSE1YGL238W 2883 nt0.51□□□□□ -2.33
TY2A-FP0CX61 YDL007C-AYDL007C-A 258 nt0.51□□□□□ -2.33
TY2A-FP0CX61 ORC3YLL004W 1851 nt0.51□□□□□ -2.33
TY2A-FP0CX61 tF(GAA)BtF(GAA)B 73 nt0.5□□□□□ -2.33
TY2A-FP0CX61 tF(GAA)FtF(GAA)F 73 nt0.5□□□□□ -2.33
TY2A-FP0CX61 tF(GAA)GtF(GAA)G 73 nt0.5□□□□□ -2.33
TY2A-FP0CX61 tF(GAA)H1tF(GAA)H1 73 nt0.5□□□□□ -2.33
TY2A-FP0CX61 tF(GAA)H2tF(GAA)H2 73 nt0.5□□□□□ -2.33
TY2A-FP0CX61 tF(GAA)MtF(GAA)M 73 nt0.5□□□□□ -2.33
TY2A-FP0CX61 tF(GAA)P1tF(GAA)P1 73 nt0.5□□□□□ -2.33
TY2A-FP0CX61 tF(GAA)P2tF(GAA)P2 73 nt0.5□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 9.8 ms