Protein–RNA interactions for Protein: P04786

TOP1, DNA topoisomerase 1, yeastyeast

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOP1P04786 YKU70YMR284W 1809 nt0.87□□□□□ -2.27
TOP1P04786 RPL26BYGR034W 384 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)BtT(AGU)B 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)CtT(AGU)C 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)DtT(AGU)D 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)HtT(AGU)H 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)I1tT(AGU)I1 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)I2tT(AGU)I2 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)JtT(AGU)J 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)N1tT(AGU)N1 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)N2tT(AGU)N2 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)O1tT(AGU)O1 73 nt0.86□□□□□ -2.27
TOP1P04786 tT(AGU)O2tT(AGU)O2 73 nt0.86□□□□□ -2.27
TOP1P04786 YNL097C-BYNL097C-B 123 nt0.86□□□□□ -2.27
TOP1P04786 COX12YLR038C 252 nt0.85□□□□□ -2.27
TOP1P04786 HAL9YOL089C 3093 nt0.85□□□□□ -2.27
TOP1P04786 COY1YKL179C 2040 nt0.84□□□□□ -2.28
TOP1P04786 YOR161W-AYOR161W-A 81 nt0.83□□□□□ -2.28
TOP1P04786 YOR345CYOR345C 351 nt0.83□□□□□ -2.28
TOP1P04786 YCR018C-AYCR018C-A 255 nt0.82□□□□□ -2.28
TOP1P04786 YLR282CYLR282C 342 nt0.82□□□□□ -2.28
TOP1P04786 YMR272W-AYMR272W-A 114 nt0.82□□□□□ -2.28
TOP1P04786 snR190snR190 190 nt0.82□□□□□ -2.28
TOP1P04786 YPR160W-AYPR160W-A 81 nt0.82□□□□□ -2.28
TOP1P04786 PRP5YBR237W 2550 nt0.81□□□□□ -2.28
TOP1P04786 YGL123C-AYGL123C-A 231 nt0.8□□□□□ -2.28
TOP1P04786 YBR131C-AYBR131C-A 90 nt0.8□□□□□ -2.28
TOP1P04786 SEC8YPR055W 3198 nt0.79□□□□□ -2.28
TOP1P04786 ULI1YFR026C 510 nt0.79□□□□□ -2.28
TOP1P04786 COX5BYIL111W 456 nt0.79□□□□□ -2.28
TOP1P04786 YLR041WYLR041W 321 nt0.79□□□□□ -2.28
TOP1P04786 YML002WYML002W 2214 nt0.79□□□□□ -2.28
TOP1P04786 FYV10YIL097W 1551 nt0.77□□□□□ -2.29
TOP1P04786 YER053C-AYER053C-A 114 nt0.76□□□□□ -2.29
TOP1P04786 APQ12YIL040W 417 nt0.76□□□□□ -2.29
TOP1P04786 YLR399W-AYLR399W-A 105 nt0.76□□□□□ -2.29
TOP1P04786 UTP10YJL109C 5310 nt0.75□□□□□ -2.29
TOP1P04786 YIL002W-AYIL002W-A 210 nt0.75□□□□□ -2.29
TOP1P04786 YCR038W-AYCR038W-A 126 nt0.74□□□□□ -2.29
TOP1P04786 tN(GUU)QtN(GUU)Q 71 nt0.74□□□□□ -2.29
TOP1P04786 BLI1YKL061W 342 nt0.74□□□□□ -2.29
TOP1P04786 YMR158W-BYMR158W-B 321 nt0.74□□□□□ -2.29
TOP1P04786 AI1Q0050 2505 nt0.74□□□□□ -2.29
TOP1P04786 BEM3YPL115C 3387 nt0.73□□□□□ -2.29
TOP1P04786 BUL2YML111W 2763 nt0.72□□□□□ -2.29
TOP1P04786 OST4YDL232W 111 nt0.72□□□□□ -2.29
TOP1P04786 ULP2YIL031W 3105 nt0.72□□□□□ -2.29
TOP1P04786 YJL127W-AYJL127W-A 117 nt0.69□□□□□ -2.3
TOP1P04786 YKL100W-AYKL100W-A 90 nt0.69□□□□□ -2.3
TOP1P04786 PRP39YML046W 1890 nt0.69□□□□□ -2.3
TOP1P04786 PRP42YDR235W 1635 nt0.68□□□□□ -2.3
TOP1P04786 snR46snR46 197 nt0.68□□□□□ -2.3
TOP1P04786 YSP1YHR155W 3687 nt0.67□□□□□ -2.3
TOP1P04786 SPG3YDR504C 384 nt0.66□□□□□ -2.3
TOP1P04786 JLP2YMR132C 627 nt0.66□□□□□ -2.3
TOP1P04786 FMP27YLR454W 7887 nt0.66□□□□□ -2.3
TOP1P04786 YER078W-AYER078W-A 165 nt0.65□□□□□ -2.31
TOP1P04786 YJL182CYJL182C 318 nt0.65□□□□□ -2.31
TOP1P04786 MLP1YKR095W 5628 nt0.64□□□□□ -2.31
TOP1P04786 YHR131W-AYHR131W-A 246 nt0.64□□□□□ -2.31
TOP1P04786 YEL014CYEL014C 306 nt0.63□□□□□ -2.31
TOP1P04786 PET111YMR257C 2403 nt0.62□□□□□ -2.31
TOP1P04786 MYO1YHR023W 5787 nt0.62□□□□□ -2.31
TOP1P04786 YMR046W-AYMR046W-A 129 nt0.61□□□□□ -2.31
TOP1P04786 SNU13YEL026W 381 nt0.6□□□□□ -2.31
TOP1P04786 YBL039C-AYBL039C-A 84 nt0.58□□□□□ -2.32
TOP1P04786 YOR192C-BYOR192C-B 5313 nt0.58□□□□□ -2.32
TOP1P04786 SBH1YER087C-B 249 nt0.56□□□□□ -2.32
TOP1P04786 tM(CAU)Q1tM(CAU)Q1 76 nt0.56□□□□□ -2.32
TOP1P04786 YPL060C-AYPL060C-A 3315 nt0.56□□□□□ -2.32
TOP1P04786 IQG1YPL242C 4488 nt0.56□□□□□ -2.32
TOP1P04786 YDR406W-AYDR406W-A 246 nt0.55□□□□□ -2.32
TOP1P04786 YGL182CYGL182C 324 nt0.54□□□□□ -2.32
TOP1P04786 YJL150WYJL150W 303 nt0.54□□□□□ -2.32
TOP1P04786 YLR232WYLR232W 348 nt0.54□□□□□ -2.32
TOP1P04786 NNF2YGR089W 2811 nt0.54□□□□□ -2.32
TOP1P04786 RPM2YML091C 3609 nt0.52□□□□□ -2.33
TOP1P04786 snR52snR52 92 nt0.52□□□□□ -2.33
TOP1P04786 NIP1YMR309C 2439 nt0.52□□□□□ -2.33
TOP1P04786 MLP2YIL149C 5040 nt0.5□□□□□ -2.33
TOP1P04786 YEL073CYEL073C 324 nt0.5□□□□□ -2.33
TOP1P04786 RPS26AYGL189C 360 nt0.5□□□□□ -2.33
TOP1P04786 YDR371C-AYDR371C-A 105 nt0.49□□□□□ -2.33
TOP1P04786 YOR381W-AYOR381W-A 168 nt0.49□□□□□ -2.33
TOP1P04786 YLL006W-AYLL006W-A 177 nt0.48□□□□□ -2.33
TOP1P04786 YBR072C-AYBR072C-A 162 nt0.48□□□□□ -2.33
TOP1P04786 ESP1YGR098C 4893 nt0.48□□□□□ -2.33
TOP1P04786 YDR544CYDR544C 429 nt0.47□□□□□ -2.33
TOP1P04786 YOR170WYOR170W 306 nt0.47□□□□□ -2.33
TOP1P04786 ORC3YLL004W 1851 nt0.47□□□□□ -2.33
TOP1P04786 SDH6YDR379C-A 240 nt0.46□□□□□ -2.34
TOP1P04786 YLR342W-AYLR342W-A 174 nt0.45□□□□□ -2.34
TOP1P04786 COG6YNL041C 2520 nt0.45□□□□□ -2.34
TOP1P04786 YOR314W-AYOR314W-A 111 nt0.44□□□□□ -2.34
TOP1P04786 YBL100W-BYBL100W-B 5313 nt0.44□□□□□ -2.34
TOP1P04786 GLG1YKR058W 1851 nt0.43□□□□□ -2.34
TOP1P04786 THO2YNL139C 4794 nt0.43□□□□□ -2.34
TOP1P04786 RCO1YMR075W 2055 nt0.42□□□□□ -2.34
TOP1P04786 snR48snR48 113 nt0.41□□□□□ -2.34
TOP1P04786 tL(UAA)QtL(UAA)Q 85 nt0.36□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms