Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.65□□□□□ -0.38
TcraP01849 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.65□□□□□ -0.38
TcraP01849 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.65□□□□□ -0.38
TcraP01849 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.64□□□□□ -0.39
TcraP01849 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.64□□□□□ -0.39
TcraP01849 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.64□□□□□ -0.39
TcraP01849 Gm43017-201ENSMUST00000198296 752 ntBASIC12.64□□□□□ -0.39
TcraP01849 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.64□□□□□ -0.39
TcraP01849 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TcraP01849 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TcraP01849 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.64□□□□□ -0.39
TcraP01849 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.64□□□□□ -0.39
TcraP01849 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.64□□□□□ -0.39
TcraP01849 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TcraP01849 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TcraP01849 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TcraP01849 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.63□□□□□ -0.39
TcraP01849 Dancr-204ENSMUST00000132389 2347 ntBASIC12.63□□□□□ -0.39
TcraP01849 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TcraP01849 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TcraP01849 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.62□□□□□ -0.39
TcraP01849 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.62□□□□□ -0.39
TcraP01849 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.62□□□□□ -0.39
TcraP01849 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.62□□□□□ -0.39
TcraP01849 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TcraP01849 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TcraP01849 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.62□□□□□ -0.39
TcraP01849 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TcraP01849 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.62□□□□□ -0.39
TcraP01849 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TcraP01849 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TcraP01849 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms