Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
VAPBO95292 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.08■□□□□ 0.8
VAPBO95292 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VAPBO95292 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
VAPBO95292 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.08■□□□□ 0.8
VAPBO95292 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.08■□□□□ 0.8
VAPBO95292 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VAPBO95292 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
VAPBO95292 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
VAPBO95292 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.08■□□□□ 0.8
VAPBO95292 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VAPBO95292 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
VAPBO95292 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.07■□□□□ 0.8
VAPBO95292 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.07■□□□□ 0.8
VAPBO95292 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
VAPBO95292 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 AL589743.5-201ENST00000616611 1050 ntBASIC20.07■□□□□ 0.8
VAPBO95292 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.07■□□□□ 0.8
VAPBO95292 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAPBO95292 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.07■□□□□ 0.8
VAPBO95292 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.07■□□□□ 0.8
VAPBO95292 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.06■□□□□ 0.8
VAPBO95292 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
VAPBO95292 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VAPBO95292 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAPBO95292 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAPBO95292 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VAPBO95292 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
VAPBO95292 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAPBO95292 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.06■□□□□ 0.8
VAPBO95292 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAPBO95292 KRT8P17-201ENST00000453110 1448 ntBASIC20.06■□□□□ 0.8
VAPBO95292 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.06■□□□□ 0.8
VAPBO95292 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
VAPBO95292 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.06■□□□□ 0.8
VAPBO95292 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAPBO95292 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VAPBO95292 KRT17P1-201ENST00000399211 1546 ntBASIC20.06■□□□□ 0.8
VAPBO95292 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
VAPBO95292 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
VAPBO95292 AC125437.2-201ENST00000625180 2167 ntBASIC20.05■□□□□ 0.8
VAPBO95292 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAPBO95292 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAPBO95292 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAPBO95292 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAPBO95292 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
VAPBO95292 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VAPBO95292 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.05■□□□□ 0.8
VAPBO95292 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.05■□□□□ 0.8
VAPBO95292 AC133552.2-202ENST00000575694 574 ntBASIC20.05■□□□□ 0.8
VAPBO95292 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.05■□□□□ 0.8
VAPBO95292 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.05■□□□□ 0.8
VAPBO95292 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.05■□□□□ 0.8
VAPBO95292 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VAPBO95292 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAPBO95292 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAPBO95292 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAPBO95292 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VAPBO95292 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.04■□□□□ 0.8
VAPBO95292 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.04■□□□□ 0.8
VAPBO95292 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.04■□□□□ 0.8
VAPBO95292 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.04■□□□□ 0.8
VAPBO95292 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 AL050303.2-201ENST00000619798 666 ntBASIC20.04■□□□□ 0.8
VAPBO95292 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.04■□□□□ 0.8
VAPBO95292 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.04■□□□□ 0.8
VAPBO95292 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAPBO95292 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.04■□□□□ 0.8
VAPBO95292 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.04■□□□□ 0.8
VAPBO95292 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VAPBO95292 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VAPBO95292 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
VAPBO95292 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms