Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
USH2AO75445 NME4-212ENST00000621774 904 ntTSL 3 BASIC8.98□□□□□ -0.97
USH2AO75445 AL136038.3-201ENST00000561909 1096 ntBASIC8.98□□□□□ -0.97
USH2AO75445 AL441883.1-201ENST00000566170 1045 ntBASIC8.98□□□□□ -0.97
USH2AO75445 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC8.98□□□□□ -0.97
USH2AO75445 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC8.98□□□□□ -0.97
USH2AO75445 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 AC092068.2-201ENST00000590491 1708 ntBASIC8.98□□□□□ -0.97
USH2AO75445 MIR3652-201ENST00000579335 131 ntBASIC8.98□□□□□ -0.97
USH2AO75445 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC8.98□□□□□ -0.97
USH2AO75445 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC8.98□□□□□ -0.97
USH2AO75445 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
USH2AO75445 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC8.98□□□□□ -0.97
USH2AO75445 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC8.98□□□□□ -0.97
USH2AO75445 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 SLC25A6P4-201ENST00000586535 553 ntBASIC8.98□□□□□ -0.97
USH2AO75445 NPAP1P7-201ENST00000613027 823 ntBASIC8.98□□□□□ -0.97
USH2AO75445 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
USH2AO75445 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
USH2AO75445 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 AC142381.3-201ENST00000568208 1670 ntBASIC8.98□□□□□ -0.97
USH2AO75445 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC8.98□□□□□ -0.97
USH2AO75445 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
USH2AO75445 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
USH2AO75445 HOMER2P1-201ENST00000455653 964 ntBASIC8.98□□□□□ -0.97
USH2AO75445 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC8.97□□□□□ -0.97
USH2AO75445 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC8.97□□□□□ -0.97
USH2AO75445 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC8.97□□□□□ -0.97
USH2AO75445 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC8.97□□□□□ -0.97
USH2AO75445 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
USH2AO75445 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC8.97□□□□□ -0.97
USH2AO75445 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC8.97□□□□□ -0.97
USH2AO75445 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC8.97□□□□□ -0.97
USH2AO75445 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC8.97□□□□□ -0.97
USH2AO75445 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC8.97□□□□□ -0.97
USH2AO75445 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 AL035633.1-201ENST00000406139 838 ntBASIC8.97□□□□□ -0.97
USH2AO75445 AC097488.1-201ENST00000507834 756 ntBASIC8.97□□□□□ -0.97
USH2AO75445 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC8.97□□□□□ -0.97
USH2AO75445 SLC25A1P1-201ENST00000528351 927 ntBASIC8.97□□□□□ -0.97
USH2AO75445 IFNL4P1-201ENST00000607083 540 ntBASIC8.97□□□□□ -0.97
USH2AO75445 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC8.97□□□□□ -0.97
USH2AO75445 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USH2AO75445 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC8.97□□□□□ -0.97
USH2AO75445 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
USH2AO75445 HLA-J-202ENST00000469281 1241 ntBASIC8.97□□□□□ -0.97
USH2AO75445 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC8.97□□□□□ -0.97
USH2AO75445 AC027796.2-201ENST00000575326 344 ntBASIC8.97□□□□□ -0.97
USH2AO75445 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC8.97□□□□□ -0.97
USH2AO75445 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
USH2AO75445 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
USH2AO75445 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
USH2AO75445 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
USH2AO75445 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
USH2AO75445 AC139530.1-201ENST00000575312 1977 ntBASIC8.96□□□□□ -0.97
USH2AO75445 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC8.96□□□□□ -0.97
USH2AO75445 ME2-206ENST00000638410 2289 ntTSL 5 BASIC8.96□□□□□ -0.97
USH2AO75445 ME2-210ENST00000639255 2262 ntTSL 5 BASIC8.96□□□□□ -0.97
USH2AO75445 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC8.96□□□□□ -0.97
USH2AO75445 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC8.96□□□□□ -0.97
USH2AO75445 MRPL3P1-201ENST00000400109 1033 ntBASIC8.96□□□□□ -0.97
USH2AO75445 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC8.96□□□□□ -0.97
USH2AO75445 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC8.96□□□□□ -0.97
USH2AO75445 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC8.96□□□□□ -0.97
USH2AO75445 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
USH2AO75445 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
USH2AO75445 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
USH2AO75445 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
USH2AO75445 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC8.96□□□□□ -0.98
USH2AO75445 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC8.96□□□□□ -0.98
USH2AO75445 AC004980.1-204ENST00000429707 299 ntBASIC8.96□□□□□ -0.98
USH2AO75445 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC8.96□□□□□ -0.98
USH2AO75445 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC8.96□□□□□ -0.98
USH2AO75445 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms