Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
XRCC2O43543 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.35■□□□□ 0.37
XRCC2O43543 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.35■□□□□ 0.37
XRCC2O43543 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
XRCC2O43543 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 AC093787.1-201ENST00000450396 207 ntBASIC17.35■□□□□ 0.37
XRCC2O43543 AF201337.1-201ENST00000520239 748 ntBASIC17.35■□□□□ 0.37
XRCC2O43543 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.35■□□□□ 0.37
XRCC2O43543 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.35■□□□□ 0.37
XRCC2O43543 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
XRCC2O43543 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
XRCC2O43543 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.35■□□□□ 0.37
XRCC2O43543 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
XRCC2O43543 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
XRCC2O43543 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
XRCC2O43543 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
XRCC2O43543 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
XRCC2O43543 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
XRCC2O43543 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
XRCC2O43543 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
XRCC2O43543 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
XRCC2O43543 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
XRCC2O43543 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
XRCC2O43543 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
XRCC2O43543 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
XRCC2O43543 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
XRCC2O43543 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
XRCC2O43543 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
XRCC2O43543 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
XRCC2O43543 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.34■□□□□ 0.37
XRCC2O43543 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.34■□□□□ 0.37
XRCC2O43543 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.34■□□□□ 0.37
XRCC2O43543 AL031963.3-201ENST00000606441 850 ntBASIC17.34■□□□□ 0.37
XRCC2O43543 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
XRCC2O43543 AC112907.3-201ENST00000577781 2400 ntBASIC17.33■□□□□ 0.37
XRCC2O43543 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
XRCC2O43543 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
XRCC2O43543 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
XRCC2O43543 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
XRCC2O43543 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.33■□□□□ 0.37
XRCC2O43543 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.33■□□□□ 0.36
XRCC2O43543 KRT8P20-201ENST00000423953 1409 ntBASIC17.33■□□□□ 0.36
XRCC2O43543 KRT8P17-201ENST00000453110 1448 ntBASIC17.33■□□□□ 0.36
XRCC2O43543 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
XRCC2O43543 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.33■□□□□ 0.36
XRCC2O43543 MIR663A-201ENST00000385250 93 ntBASIC17.33■□□□□ 0.36
XRCC2O43543 LSM12P1-201ENST00000411836 588 ntBASIC17.33■□□□□ 0.36
XRCC2O43543 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.33■□□□□ 0.36
XRCC2O43543 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.33■□□□□ 0.36
XRCC2O43543 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.33■□□□□ 0.36
XRCC2O43543 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
XRCC2O43543 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
XRCC2O43543 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
XRCC2O43543 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
XRCC2O43543 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.32■□□□□ 0.36
XRCC2O43543 PTBP1P-201ENST00000554374 1601 ntBASIC17.32■□□□□ 0.36
XRCC2O43543 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XRCC2O43543 MKRN4P-201ENST00000444706 1521 ntBASIC17.32■□□□□ 0.36
XRCC2O43543 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
XRCC2O43543 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XRCC2O43543 KRT16P6-202ENST00000425692 1426 ntBASIC17.32■□□□□ 0.36
XRCC2O43543 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XRCC2O43543 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XRCC2O43543 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.32■□□□□ 0.36
XRCC2O43543 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XRCC2O43543 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.32■□□□□ 0.36
XRCC2O43543 HLA-G-202ENST00000376815 851 ntBASIC17.32■□□□□ 0.36
XRCC2O43543 HLA-G-203ENST00000376818 1127 ntBASIC17.32■□□□□ 0.36
XRCC2O43543 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.32■□□□□ 0.36
XRCC2O43543 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.32■□□□□ 0.36
XRCC2O43543 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.32■□□□□ 0.36
XRCC2O43543 C2orf69P4-201ENST00000565394 541 ntBASIC17.32■□□□□ 0.36
XRCC2O43543 AC105036.2-201ENST00000569468 176 ntBASIC17.32■□□□□ 0.36
XRCC2O43543 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XRCC2O43543 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
XRCC2O43543 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.32■□□□□ 0.36
XRCC2O43543 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.32■□□□□ 0.36
XRCC2O43543 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XRCC2O43543 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XRCC2O43543 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XRCC2O43543 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.32■□□□□ 0.36
XRCC2O43543 KRT17P1-201ENST00000399211 1546 ntBASIC17.31■□□□□ 0.36
XRCC2O43543 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.31■□□□□ 0.36
XRCC2O43543 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms