Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YFL063WYFL063W 456 nt-0.78□□□□□ -2.53
TY1B-HO13535 YOR161W-AYOR161W-A 81 nt-0.78□□□□□ -2.53
TY1B-HO13535 PAU9YBL108C-A 129 nt-0.78□□□□□ -2.53
TY1B-HO13535 CSE2YNR010W 450 nt-0.79□□□□□ -2.54
TY1B-HO13535 YER053C-AYER053C-A 114 nt-0.8□□□□□ -2.54
TY1B-HO13535 YML100W-AYML100W-A 174 nt-0.8□□□□□ -2.54
TY1B-HO13535 VPS20YMR077C 666 nt-0.8□□□□□ -2.54
TY1B-HO13535 snR36snR36 182 nt-0.8□□□□□ -2.54
TY1B-HO13535 PRM3YPL192C 402 nt-0.82□□□□□ -2.54
TY1B-HO13535 YPR010C-AYPR010C-A 219 nt-0.83□□□□□ -2.54
TY1B-HO13535 YLL019W-AYLL019W-A 93 nt-0.84□□□□□ -2.54
TY1B-HO13535 YER079WYER079W 633 nt-0.85□□□□□ -2.55
TY1B-HO13535 STE18YJR086W 333 nt-0.85□□□□□ -2.55
TY1B-HO13535 YKL123WYKL123W 381 nt-0.85□□□□□ -2.55
TY1B-HO13535 TOM22YNL131W 459 nt-0.85□□□□□ -2.55
TY1B-HO13535 YIL115W-AYIL115W-A 372 nt-0.87□□□□□ -2.55
TY1B-HO13535 YLR264C-AYLR264C-A 117 nt-0.87□□□□□ -2.55
TY1B-HO13535 YGR069WYGR069W 336 nt-0.89□□□□□ -2.55
TY1B-HO13535 COG6YNL041C 2520 nt-0.9□□□□□ -2.55
TY1B-HO13535 YDL007C-AYDL007C-A 258 nt-0.91□□□□□ -2.55
TY1B-HO13535 BI2Q0110 1272 nt-0.91□□□□□ -2.56
TY1B-HO13535 YJL197C-AYJL197C-A 282 nt-0.96□□□□□ -2.56
TY1B-HO13535 YMR193C-AYMR193C-A 387 nt-0.96□□□□□ -2.56
TY1B-HO13535 APQ12YIL040W 417 nt-0.98□□□□□ -2.57
TY1B-HO13535 snR161snR161 161 nt-0.98□□□□□ -2.57
TY1B-HO13535 CSN9YDR179C 489 nt-0.99□□□□□ -2.57
TY1B-HO13535 snR41snR41 95 nt-0.99□□□□□ -2.57
TY1B-HO13535 YOR072W-BYOR072W-B 162 nt-1.01□□□□□ -2.57
TY1B-HO13535 YGL052WYGL052W 306 nt-1.01□□□□□ -2.57
TY1B-HO13535 YGL182CYGL182C 324 nt-1.02□□□□□ -2.57
TY1B-HO13535 YNL122CYNL122C 348 nt-1.02□□□□□ -2.57
TY1B-HO13535 snR49snR49 165 nt-1.03□□□□□ -2.57
TY1B-HO13535 YLR406C-AYLR406C-A 150 nt-1.03□□□□□ -2.58
TY1B-HO13535 YDR544CYDR544C 429 nt-1.04□□□□□ -2.58
TY1B-HO13535 YOR015WYOR015W 360 nt-1.04□□□□□ -2.58
TY1B-HO13535 YPR016W-AYPR016W-A 261 nt-1.06□□□□□ -2.58
TY1B-HO13535 YER137W-AYER137W-A 306 nt-1.06□□□□□ -2.58
TY1B-HO13535 YLR434CYLR434C 384 nt-1.06□□□□□ -2.58
TY1B-HO13535 YGL149WYGL149W 306 nt-1.07□□□□□ -2.58
TY1B-HO13535 YJL182CYJL182C 318 nt-1.07□□□□□ -2.58
TY1B-HO13535 YLR154W-FYLR154W-F 141 nt-1.08□□□□□ -2.58
TY1B-HO13535 YOR314W-AYOR314W-A 111 nt-1.08□□□□□ -2.58
TY1B-HO13535 YOL013W-BYOL013W-B 291 nt-1.1□□□□□ -2.59
TY1B-HO13535 YDL158CYDL158C 309 nt-1.11□□□□□ -2.59
TY1B-HO13535 YMR001C-AYMR001C-A 231 nt-1.11□□□□□ -2.59
TY1B-HO13535 YAF9YNL107W 681 nt-1.11□□□□□ -2.59
TY1B-HO13535 YER090C-AYER090C-A 90 nt-1.12□□□□□ -2.59
TY1B-HO13535 YIL032CYIL032C 357 nt-1.12□□□□□ -2.59
TY1B-HO13535 YDR048CYDR048C 315 nt-1.13□□□□□ -2.59
TY1B-HO13535 YJL077W-AYJL077W-A 87 nt-1.13□□□□□ -2.59
TY1B-HO13535 tQ(UUG)QtQ(UUG)Q 76 nt-1.13□□□□□ -2.59
TY1B-HO13535 YKL063CYKL063C 504 nt-1.13□□□□□ -2.59
TY1B-HO13535 tR(UCU)Q1tR(UCU)Q1 73 nt-1.14□□□□□ -2.59
TY1B-HO13535 YNL028WYNL028W 318 nt-1.14□□□□□ -2.59
TY1B-HO13535 snR60snR60 104 nt-1.15□□□□□ -2.59
TY1B-HO13535 HMRA1YCR097W 381 nt-1.16□□□□□ -2.59
TY1B-HO13535 YNR025CYNR025C 360 nt-1.16□□□□□ -2.6
TY1B-HO13535 YBR285WYBR285W 435 nt-1.16□□□□□ -2.6
TY1B-HO13535 YBL039C-AYBL039C-A 84 nt-1.19□□□□□ -2.6
TY1B-HO13535 YLR202CYLR202C 327 nt-1.2□□□□□ -2.6
TY1B-HO13535 YNL324WYNL324W 396 nt-1.21□□□□□ -2.6
TY1B-HO13535 YOR121CYOR121C 306 nt-1.21□□□□□ -2.6
TY1B-HO13535 snR189snR189 189 nt-1.21□□□□□ -2.6
TY1B-HO13535 tW(UCA)QtW(UCA)Q 74 nt-1.24□□□□□ -2.61
TY1B-HO13535 BIL1YOR304C-A 231 nt-1.24□□□□□ -2.61
TY1B-HO13535 YNL266WYNL266W 420 nt-1.27□□□□□ -2.61
TY1B-HO13535 YOR170WYOR170W 306 nt-1.29□□□□□ -2.62
TY1B-HO13535 YFL032WYFL032W 321 nt-1.29□□□□□ -2.62
TY1B-HO13535 snR74snR74 88 nt-1.3□□□□□ -2.62
TY1B-HO13535 ATP6Q0085 780 nt-1.3□□□□□ -2.62
TY1B-HO13535 snR78snR78 87 nt-1.31□□□□□ -2.62
TY1B-HO13535 YDR102CYDR102C 333 nt-1.33□□□□□ -2.62
TY1B-HO13535 YML099W-AYML099W-A 330 nt-1.33□□□□□ -2.62
TY1B-HO13535 tP(UGG)QtP(UGG)Q 72 nt-1.34□□□□□ -2.62
TY1B-HO13535 JLP2YMR132C 627 nt-1.34□□□□□ -2.62
TY1B-HO13535 HTL1YCR020W-B 237 nt-1.34□□□□□ -2.62
TY1B-HO13535 YAL063C-AYAL063C-A 291 nt-1.35□□□□□ -2.63
TY1B-HO13535 YMR172C-AYMR172C-A 384 nt-1.35□□□□□ -2.63
TY1B-HO13535 RDS3YPR094W 324 nt-1.35□□□□□ -2.63
TY1B-HO13535 snR69snR69 101 nt-1.37□□□□□ -2.63
TY1B-HO13535 YER097WYER097W 330 nt-1.38□□□□□ -2.63
TY1B-HO13535 YLR120W-AYLR120W-A 102 nt-1.38□□□□□ -2.63
TY1B-HO13535 snR50snR50 90 nt-1.38□□□□□ -2.63
TY1B-HO13535 SKI7YOR076C 2244 nt-1.4□□□□□ -2.63
TY1B-HO13535 YGR146C-AYGR146C-A 162 nt-1.42□□□□□ -2.64
TY1B-HO13535 YFL019CYFL019C 354 nt-1.43□□□□□ -2.64
TY1B-HO13535 YAL068W-AYAL068W-A 255 nt-1.43□□□□□ -2.64
TY1B-HO13535 tD(GUC)QtD(GUC)Q 75 nt-1.44□□□□□ -2.64
TY1B-HO13535 PMP2YEL017C-A 132 nt-1.44□□□□□ -2.64
TY1B-HO13535 YOR293C-AYOR293C-A 150 nt-1.44□□□□□ -2.64
TY1B-HO13535 snR39BsnR39B 96 nt-1.44□□□□□ -2.64
TY1B-HO13535 YEL050W-AYEL050W-A 192 nt-1.44□□□□□ -2.64
TY1B-HO13535 YBR182C-AYBR182C-A 195 nt-1.45□□□□□ -2.64
TY1B-HO13535 YGR035CYGR035C 351 nt-1.46□□□□□ -2.64
TY1B-HO13535 ATP19YOL077W-A 207 nt-1.46□□□□□ -2.64
TY1B-HO13535 tM(CAU)Q2tM(CAU)Q2 78 nt-1.47□□□□□ -2.64
TY1B-HO13535 snR67snR67 82 nt-1.48□□□□□ -2.65
TY1B-HO13535 YDR183C-AYDR183C-A 258 nt-1.48□□□□□ -2.65
TY1B-HO13535 tY(GUA)QtY(GUA)Q 84 nt-1.48□□□□□ -2.65
TY1B-HO13535 YOR008C-AYOR008C-A 225 nt-1.49□□□□□ -2.65
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms