Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NDUFA4O00483 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NDUFA4O00483 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFA4O00483 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.35■□□□□ 0.05
NDUFA4O00483 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.35■□□□□ 0.05
NDUFA4O00483 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.35■□□□□ 0.05
NDUFA4O00483 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
NDUFA4O00483 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.35■□□□□ 0.05
NDUFA4O00483 AL109923.1-201ENST00000618799 583 ntBASIC15.35■□□□□ 0.05
NDUFA4O00483 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
NDUFA4O00483 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NDUFA4O00483 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NDUFA4O00483 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFA4O00483 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 AL391422.3-201ENST00000603791 2761 ntBASIC15.35■□□□□ 0.05
NDUFA4O00483 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDUFA4O00483 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NDUFA4O00483 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.34■□□□□ 0.05
NDUFA4O00483 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
NDUFA4O00483 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NDUFA4O00483 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.34■□□□□ 0.05
NDUFA4O00483 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.34■□□□□ 0.05
NDUFA4O00483 AC091874.3-201ENST00000512672 1195 ntBASIC15.34■□□□□ 0.05
NDUFA4O00483 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.34■□□□□ 0.05
NDUFA4O00483 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.34■□□□□ 0.05
NDUFA4O00483 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.34■□□□□ 0.05
NDUFA4O00483 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NDUFA4O00483 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
NDUFA4O00483 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.34■□□□□ 0.05
NDUFA4O00483 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA4O00483 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NDUFA4O00483 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NDUFA4O00483 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NDUFA4O00483 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.33■□□□□ 0.05
NDUFA4O00483 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA4O00483 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA4O00483 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA4O00483 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA4O00483 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.33■□□□□ 0.04
NDUFA4O00483 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA4O00483 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFA4O00483 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NDUFA4O00483 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
NDUFA4O00483 AL390719.1-204ENST00000412397 1219 ntBASIC15.33■□□□□ 0.04
NDUFA4O00483 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.33■□□□□ 0.04
NDUFA4O00483 AC097658.1-201ENST00000475555 843 ntBASIC15.33■□□□□ 0.04
NDUFA4O00483 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.33■□□□□ 0.04
NDUFA4O00483 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.33■□□□□ 0.04
NDUFA4O00483 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFA4O00483 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFA4O00483 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA4O00483 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
NDUFA4O00483 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NDUFA4O00483 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA4O00483 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA4O00483 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
NDUFA4O00483 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFA4O00483 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFA4O00483 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFA4O00483 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NDUFA4O00483 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NDUFA4O00483 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA4O00483 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA4O00483 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA4O00483 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NDUFA4O00483 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA4O00483 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFA4O00483 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFA4O00483 AC073210.2-201ENST00000430369 194 ntBASIC15.32■□□□□ 0.04
NDUFA4O00483 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFA4O00483 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFA4O00483 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFA4O00483 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA4O00483 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA4O00483 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA4O00483 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA4O00483 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms