Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.57■□□□□ 0.72
EIF3FO00303 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.57■□□□□ 0.72
EIF3FO00303 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.57■□□□□ 0.72
EIF3FO00303 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.57■□□□□ 0.72
EIF3FO00303 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.57■□□□□ 0.72
EIF3FO00303 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.57■□□□□ 0.72
EIF3FO00303 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.57■□□□□ 0.72
EIF3FO00303 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3FO00303 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3FO00303 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EIF3FO00303 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
EIF3FO00303 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 AL691432.2-201ENST00000607222 2038 ntBASIC19.56■□□□□ 0.72
EIF3FO00303 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.56■□□□□ 0.72
EIF3FO00303 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.56■□□□□ 0.72
EIF3FO00303 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3FO00303 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
EIF3FO00303 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3FO00303 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.56■□□□□ 0.72
EIF3FO00303 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.56■□□□□ 0.72
EIF3FO00303 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3FO00303 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3FO00303 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.56■□□□□ 0.72
EIF3FO00303 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EIF3FO00303 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
EIF3FO00303 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
EIF3FO00303 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.55■□□□□ 0.72
EIF3FO00303 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.55■□□□□ 0.72
EIF3FO00303 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.55■□□□□ 0.72
EIF3FO00303 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.55■□□□□ 0.72
EIF3FO00303 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.55■□□□□ 0.72
EIF3FO00303 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.55■□□□□ 0.72
EIF3FO00303 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.55■□□□□ 0.72
EIF3FO00303 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 MYC-209ENST00000641252 345 ntBASIC19.55■□□□□ 0.72
EIF3FO00303 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
EIF3FO00303 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
EIF3FO00303 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EIF3FO00303 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.54■□□□□ 0.72
EIF3FO00303 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 AC009237.14-201ENST00000609975 1594 ntBASIC19.54■□□□□ 0.72
EIF3FO00303 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.54■□□□□ 0.72
EIF3FO00303 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.54■□□□□ 0.72
EIF3FO00303 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
EIF3FO00303 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.54■□□□□ 0.72
EIF3FO00303 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.54■□□□□ 0.72
EIF3FO00303 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.54■□□□□ 0.72
EIF3FO00303 AC090192.1-201ENST00000517740 490 ntBASIC19.54■□□□□ 0.72
EIF3FO00303 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.54■□□□□ 0.72
EIF3FO00303 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
EIF3FO00303 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.54■□□□□ 0.72
EIF3FO00303 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
EIF3FO00303 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3FO00303 AP001271.2-201ENST00000624018 1556 ntBASIC19.53■□□□□ 0.72
EIF3FO00303 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
EIF3FO00303 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3FO00303 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
EIF3FO00303 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3FO00303 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3FO00303 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.53■□□□□ 0.72
EIF3FO00303 AC097658.1-201ENST00000475555 843 ntBASIC19.53■□□□□ 0.72
EIF3FO00303 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.53■□□□□ 0.72
EIF3FO00303 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.53■□□□□ 0.72
EIF3FO00303 AL109923.1-201ENST00000618799 583 ntBASIC19.53■□□□□ 0.72
EIF3FO00303 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3FO00303 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.53■□□□□ 0.72
EIF3FO00303 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3FO00303 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3FO00303 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.53■□□□□ 0.72
EIF3FO00303 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
EIF3FO00303 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms