Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC1O00299 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC1O00299 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC1O00299 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLIC1O00299 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC1O00299 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC1O00299 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLIC1O00299 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC1O00299 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC1O00299 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC1O00299 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CLIC1O00299 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC1O00299 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC1O00299 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC1O00299 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC1O00299 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC1O00299 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC1O00299 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.81■□□□□ 0.6
CLIC1O00299 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CLIC1O00299 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.81■□□□□ 0.6
CLIC1O00299 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC1O00299 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC1O00299 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC1O00299 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.81■□□□□ 0.6
CLIC1O00299 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLIC1O00299 AC016405.3-201ENST00000607710 860 ntBASIC18.81■□□□□ 0.6
CLIC1O00299 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.81■□□□□ 0.6
CLIC1O00299 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC1O00299 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC1O00299 PTBP1P-201ENST00000554374 1601 ntBASIC18.81■□□□□ 0.6
CLIC1O00299 AC005332.7-201ENST00000614046 2005 ntBASIC18.81■□□□□ 0.6
CLIC1O00299 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC1O00299 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
CLIC1O00299 BX323043.1-201ENST00000641006 1765 ntBASIC18.81■□□□□ 0.6
CLIC1O00299 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 RNF165-205ENST00000588679 2904 ntBASIC18.8■□□□□ 0.6
CLIC1O00299 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLIC1O00299 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.8■□□□□ 0.6
CLIC1O00299 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.8■□□□□ 0.6
CLIC1O00299 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 AC007322.4-201ENST00000509611 723 ntBASIC18.8■□□□□ 0.6
CLIC1O00299 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.8■□□□□ 0.6
CLIC1O00299 AC013268.1-206ENST00000638368 961 ntBASIC18.8■□□□□ 0.6
CLIC1O00299 AC112229.1-201ENST00000639295 961 ntBASIC18.8■□□□□ 0.6
CLIC1O00299 AC093484.2-201ENST00000580996 2166 ntBASIC18.8■□□□□ 0.6
CLIC1O00299 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.8■□□□□ 0.6
CLIC1O00299 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLIC1O00299 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLIC1O00299 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.8■□□□□ 0.6
CLIC1O00299 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC1O00299 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
CLIC1O00299 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.79■□□□□ 0.6
CLIC1O00299 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.79■□□□□ 0.6
CLIC1O00299 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.79■□□□□ 0.6
CLIC1O00299 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.79■□□□□ 0.6
CLIC1O00299 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLIC1O00299 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.79■□□□□ 0.6
CLIC1O00299 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLIC1O00299 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 KRT8P17-201ENST00000453110 1448 ntBASIC18.79■□□□□ 0.6
CLIC1O00299 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.79■□□□□ 0.6
CLIC1O00299 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.79■□□□□ 0.6
CLIC1O00299 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLIC1O00299 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC1O00299 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.79■□□□□ 0.6
CLIC1O00299 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLIC1O00299 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC1O00299 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.78■□□□□ 0.6
CLIC1O00299 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC1O00299 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLIC1O00299 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC1O00299 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms