Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 AC008870.2-201ENST00000568262 1024 ntBASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 SNORA70D-201ENST00000578836 135 ntBASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 GTF2IP6-201ENST00000583143 541 ntBASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 AL022324.3-201ENST00000609330 747 ntBASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 AC004943.1-203ENST00000624370 1074 ntBASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 AC005785.2-201ENST00000624655 631 ntBASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 AC087269.2-201ENST00000641764 975 ntBASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 AL357556.1-201ENST00000421884 1388 ntBASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.78□□□□□ -1.48
RCL1Q9Y2P8 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC022905.1-201ENST00000503430 3048 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 RN7SKP36-201ENST00000363997 312 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 RNA5SP79-201ENST00000365193 109 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 RPL9P21-201ENST00000392269 505 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 PPIAP2-201ENST00000414143 492 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AL451074.4-201ENST00000447545 470 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 RN7SL505P-201ENST00000482644 293 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC074386.1-206ENST00000487102 761 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 RN7SL434P-201ENST00000495872 271 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 SOX5-213ENST00000541847 758 ntTSL 3 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 SOD1P2-201ENST00000563903 451 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 MIR4266-201ENST00000583300 55 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 PRELID3BP3-201ENST00000584963 545 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC087575.1-201ENST00000585087 229 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 LINC00674-202ENST00000590734 160 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AC093829.1-201ENST00000506662 1618 ntBASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RCL1Q9Y2P8 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 AC119674.1-204ENST00000641348 1343 ntBASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.76□□□□□ -1.49
RCL1Q9Y2P8 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms