Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 CNN3P1-201ENST00000401596 935 ntBASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 RN7SKP30-201ENST00000411373 334 ntBASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC009303.1-201ENST00000426307 352 ntBASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC239800.1-201ENST00000442049 719 ntBASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC008676.3-201ENST00000521237 435 ntBASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AL136139.1-201ENST00000605568 222 ntBASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AP005329.3-201ENST00000609924 686 ntBASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 OR5AU1-204ENST00000641822 1197 ntBASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 AC007938.1-201ENST00000562524 2902 ntBASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.71□□□□□ -1.01
CHMP4CQ96CF2 OR4C1P-202ENST00000641065 1569 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 SSX6-201ENST00000376932 562 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 MIR431-201ENST00000385266 114 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 RPL31-202ENST00000409000 641 ntTSL 2 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 EEF1GP7-201ENST00000422983 703 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AL645936.2-201ENST00000430565 928 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 PRKAR1AP1-201ENST00000441422 1162 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 RPL36AP55-201ENST00000454114 305 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 CBX5P1-201ENST00000468470 561 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 RPL5P16-201ENST00000471467 790 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AC009153.1-201ENST00000485799 496 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AC008040.4-201ENST00000494834 768 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AC026774.2-201ENST00000513990 1098 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AL132640.2-202ENST00000559732 614 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AL353807.4-201ENST00000604995 257 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AL121583.1-201ENST00000612444 682 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AL121985.2-201ENST00000621192 555 ntBASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
CHMP4CQ96CF2 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms