Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.43□□□□□ -1.22
SLC1A1P43005 TPTE2P2-201ENST00000403471 1466 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.43□□□□□ -1.22
SLC1A1P43005 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
SLC1A1P43005 AC022819.1-201ENST00000563495 3910 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.43□□□□□ -1.22
SLC1A1P43005 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.43□□□□□ -1.22
SLC1A1P43005 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.43□□□□□ -1.22
SLC1A1P43005 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 AL117339.4-201ENST00000608335 7063 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.43□□□□□ -1.22
SLC1A1P43005 RNU1-24P-201ENST00000364285 165 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SLC1A1P43005 RN7SKP254-201ENST00000410685 310 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.43□□□□□ -1.22
SLC1A1P43005 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.43□□□□□ -1.22
SLC1A1P43005 PSMC1P2-201ENST00000423961 1204 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 AC007790.1-201ENST00000439081 782 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 AC009237.4-201ENST00000441078 238 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC7.43□□□□□ -1.22
SLC1A1P43005 SDHCP3-201ENST00000445371 506 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 AC135721.2-201ENST00000464237 300 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 TAAR3P-201ENST00000466706 1078 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.43□□□□□ -1.22
SLC1A1P43005 RN7SL228P-201ENST00000470060 303 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 RPL7P17-201ENST00000470927 724 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 TAAR3P-202ENST00000481759 1025 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
SLC1A1P43005 AC016144.1-201ENST00000548175 1087 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.43□□□□□ -1.22
SLC1A1P43005 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.43□□□□□ -1.22
SLC1A1P43005 AC005070.1-201ENST00000603744 365 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
SLC1A1P43005 AL139123.1-201ENST00000612008 430 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 AC127071.1-201ENST00000624997 712 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.43□□□□□ -1.22
SLC1A1P43005 AL139254.2-202ENST00000641937 1156 ntBASIC7.43□□□□□ -1.22
SLC1A1P43005 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
SLC1A1P43005 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
SLC1A1P43005 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.43□□□□□ -1.22
SLC1A1P43005 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SLC1A1P43005 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SLC1A1P43005 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SLC1A1P43005 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SLC1A1P43005 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 RNA5SP472-201ENST00000363868 119 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 MIR128-2-201ENST00000384893 84 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SLC1A1P43005 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.42□□□□□ -1.22
SLC1A1P43005 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.42□□□□□ -1.22
SLC1A1P43005 PRPS1P2-201ENST00000430496 937 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SLC1A1P43005 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.42□□□□□ -1.22
SLC1A1P43005 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.42□□□□□ -1.22
SLC1A1P43005 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 AC106800.2-201ENST00000514009 1103 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.42□□□□□ -1.22
SLC1A1P43005 EEF1B2P2-201ENST00000519625 676 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC7.42□□□□□ -1.22
SLC1A1P43005 OR4A21P-201ENST00000532759 944 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.42□□□□□ -1.22
SLC1A1P43005 OR5BK1P-201ENST00000550421 823 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 DPPA3P2-201ENST00000553589 478 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.42□□□□□ -1.22
SLC1A1P43005 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC7.42□□□□□ -1.22
SLC1A1P43005 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.42□□□□□ -1.22
SLC1A1P43005 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SLC1A1P43005 AC026951.2-201ENST00000613847 241 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.42□□□□□ -1.22
SLC1A1P43005 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.42□□□□□ -1.22
SLC1A1P43005 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.42□□□□□ -1.22
SLC1A1P43005 AL031651.1-201ENST00000615357 1438 ntBASIC7.42□□□□□ -1.22
SLC1A1P43005 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.42□□□□□ -1.22
SLC1A1P43005 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SLC1A1P43005 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.41□□□□□ -1.22
SLC1A1P43005 MFSD8-256ENST00000641949 1640 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SLC1A1P43005 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms