Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RPL17P17-201ENST00000419491 557 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC092646.1-201ENST00000427142 901 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 OSTCP2-201ENST00000437956 444 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 BX005266.3-201ENST00000443013 1075 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 OR51P1P-201ENST00000447547 942 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 PRDX1P1-201ENST00000449329 596 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 GAPDHP53-201ENST00000458397 924 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC079193.1-201ENST00000460497 588 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AL591122.1-201ENST00000487348 492 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 RPL21P42-201ENST00000488408 464 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC105391.1-201ENST00000503155 1045 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 RN7SKP233-201ENST00000517005 110 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 OR5M6P-201ENST00000530227 937 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AP004607.5-201ENST00000532034 217 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 MIR4800-201ENST00000537353 80 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 MIR3135A-201ENST00000578460 77 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC024085.1-201ENST00000604299 432 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AC010480.1-201ENST00000624823 684 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 AL353898.3-201ENST00000624679 1755 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 CDY7P-201ENST00000429883 1604 ntBASIC6.58□□□□□ -1.36
C9orf40Q8IXQ3 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC093844.1-201ENST00000514910 1361 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AL121949.2-201ENST00000403446 1548 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 RNU12-2P-201ENST00000364789 156 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 RN7SKP55-201ENST00000364888 307 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 VN1R66P-201ENST00000412929 916 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC009500.1-201ENST00000420684 583 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC009362.1-201ENST00000427253 406 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 RPL36AP55-201ENST00000454114 305 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 SCDP1-201ENST00000455244 1081 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC126615.1-201ENST00000470084 630 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AP005202.1-201ENST00000489915 867 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC073648.3-201ENST00000504939 925 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 RPL7L1P7-201ENST00000509986 724 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC096708.2-201ENST00000577676 512 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 RN7SL131P-201ENST00000579043 256 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AL512430.4-201ENST00000603085 613 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC063962.1-201ENST00000608199 521 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AL161420.1-201ENST00000619393 264 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AL450226.2-201ENST00000622913 439 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC012629.3-201ENST00000623397 328 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AP003108.4-201ENST00000623917 878 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AC026108.1-201ENST00000635444 547 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms