Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 AL353151.1-201ENST00000402406 604 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 MTND4LP17-201ENST00000414607 293 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX3Q99909 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC6.23□□□□□ -1.41
SSX3Q99909 LDHAP2-201ENST00000437325 985 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX3Q99909 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 AL161454.1-201ENST00000446226 569 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 RPS18P13-201ENST00000461260 454 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 AC022730.2-201ENST00000465359 452 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 RN7SL282P-201ENST00000479676 297 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 RN7SL335P-201ENST00000482790 304 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 AC111000.5-201ENST00000506559 1178 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 ENPP7P3-201ENST00000509123 241 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSX3Q99909 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.23□□□□□ -1.41
SSX3Q99909 AC027667.1-201ENST00000545814 304 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.23□□□□□ -1.41
SSX3Q99909 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC6.23□□□□□ -1.41
SSX3Q99909 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.23□□□□□ -1.41
SSX3Q99909 AC133569.1-201ENST00000564327 373 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX3Q99909 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC6.23□□□□□ -1.41
SSX3Q99909 AC107993.1-201ENST00000591343 684 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.23□□□□□ -1.41
SSX3Q99909 AC012511.1-201ENST00000608140 449 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
SSX3Q99909 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.23□□□□□ -1.41
SSX3Q99909 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX3Q99909 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX3Q99909 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
SSX3Q99909 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX3Q99909 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX3Q99909 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX3Q99909 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX3Q99909 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX3Q99909 AP000866.6-201ENST00000638898 3579 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSX3Q99909 AC027313.1-201ENST00000509159 1666 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX3Q99909 TTC41P-205ENST00000551270 3963 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 AL590065.1-201ENST00000603371 4774 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 MTCO1P46-201ENST00000451639 1491 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX3Q99909 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX3Q99909 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SSX3Q99909 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 NF1P7-201ENST00000612076 1530 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 RNA5SP23-201ENST00000391006 105 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 TERF1P4-201ENST00000399580 1115 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 AL050305.1-201ENST00000399993 1230 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 RANP7-201ENST00000418085 644 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 AL022100.1-202ENST00000421214 548 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 RPSAP62-201ENST00000432596 833 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.22□□□□□ -1.41
SSX3Q99909 AL512882.1-201ENST00000436086 832 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 ST13P2-201ENST00000438916 1109 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC016489.1-201ENST00000461109 375 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 RPL34P22-201ENST00000468193 318 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 RN7SL861P-201ENST00000473793 285 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 AC087385.2-201ENST00000477729 498 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 RN7SL647P-201ENST00000485429 300 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 RN7SL388P-201ENST00000498736 339 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC113352.1-201ENST00000513196 666 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AP001124.1-201ENST00000529628 385 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms