Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 SNX18P3-202ENST00000565670 1750 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 RBM22P13-201ENST00000569805 1244 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AL022238.3-201ENST00000609279 443 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC073862.4-201ENST00000622982 854 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC013268.3-201ENST00000262716 2324 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 MARK2P10-201ENST00000454959 1437 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 BIN2P2-201ENST00000503900 1303 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AL117378.2-201ENST00000622916 1337 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 SSX6-201ENST00000376932 562 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AL590762.1-201ENST00000391782 432 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 DUTP4-201ENST00000424782 475 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 DDX11L10-201ENST00000430178 571 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AL122003.1-201ENST00000435206 784 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 OR3B1P-201ENST00000437536 893 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 FUNDC2P2-202ENST00000443452 493 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC012493.1-201ENST00000453252 760 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 MRPS21P1-201ENST00000453850 223 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC117395.2-201ENST00000463122 1128 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC008799.2-201ENST00000484429 647 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC034105.2-201ENST00000561866 238 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC004852.1-201ENST00000605206 154 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC103724.4-201ENST00000605981 292 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC016394.1-201ENST00000608444 833 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC012629.3-201ENST00000623397 328 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC090373.1-201ENST00000623955 603 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 AC005618.1-201ENST00000606901 3148 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 BRD7P1-201ENST00000557705 1915 ntBASIC6.11□□□□□ -1.43
BEST4Q8NFU0 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
BEST4Q8NFU0 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BEST4Q8NFU0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BEST4Q8NFU0 AC087045.3-201ENST00000623046 2468 ntBASIC6.1□□□□□ -1.43
BEST4Q8NFU0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
BEST4Q8NFU0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
BEST4Q8NFU0 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
BEST4Q8NFU0 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BEST4Q8NFU0 AL035563.1-201ENST00000609087 1539 ntBASIC6.1□□□□□ -1.43
BEST4Q8NFU0 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BEST4Q8NFU0 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms