Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 RNA5SP472-201ENST00000363868 119 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC090114.1-201ENST00000393266 448 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 PPIAP30-201ENST00000415473 519 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC093107.1-201ENST00000422772 609 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC008753.1-201ENST00000423096 284 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC105052.2-201ENST00000434317 794 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 ST13P2-201ENST00000438916 1109 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 RPSAP7-201ENST00000456871 885 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 RN7SL91P-201ENST00000469313 291 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 RN7SL797P-201ENST00000486314 297 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC016559.1-201ENST00000511420 199 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC233290.1-201ENST00000553021 1186 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AL365223.1-201ENST00000574864 1297 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 MIR4470-201ENST00000583453 72 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC006116.6-201ENST00000593258 1103 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AL049829.3-202ENST00000604278 711 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC104184.1-201ENST00000607513 721 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 MIR6807-201ENST00000621968 92 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC211433.3-201ENST00000623770 375 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AL355480.4-201ENST00000626823 69 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC073488.7-201ENST00000633785 778 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC020978.6-201ENST00000571197 3177 ntBASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.08□□□□□ -1.28
ZNF549Q6P9A3 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 Z82209.2-201ENST00000623410 2012 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 SNORA30B-201ENST00000365319 129 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 RPL12P1-201ENST00000374520 498 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AC073900.1-201ENST00000429766 776 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 HMGN1P6-201ENST00000438508 291 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AL161626.1-201ENST00000441480 490 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 GAPDHP16-201ENST00000448152 962 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 GAPDHP38-201ENST00000503632 1002 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 EIF3KP1-201ENST00000513279 656 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AC138866.1-201ENST00000514522 497 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 RN7SKP64-201ENST00000517206 328 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AC068790.1-201ENST00000536166 355 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 RPS7P1-201ENST00000571702 585 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 RN7SL311P-201ENST00000579858 306 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AC104117.5-201ENST00000606195 547 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AC143336.1-201ENST00000614164 836 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AL157762.1-201ENST00000619612 415 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AC078909.2-201ENST00000620584 398 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 AL109924.4-201ENST00000623089 670 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms