Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.29□□□□□ -1.08
COL4A5P29400 CTSLP2-201ENST00000580501 394 ntBASIC8.29□□□□□ -1.08
COL4A5P29400 CR382285.1-202ENST00000604687 547 ntBASIC8.29□□□□□ -1.08
COL4A5P29400 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.29□□□□□ -1.08
COL4A5P29400 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
COL4A5P29400 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
COL4A5P29400 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.29□□□□□ -1.08
COL4A5P29400 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL4A5P29400 ANKRD20A11P-206ENST00000451663 3717 ntBASIC8.29□□□□□ -1.08
COL4A5P29400 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
COL4A5P29400 AC020978.6-201ENST00000571197 3177 ntBASIC8.29□□□□□ -1.08
COL4A5P29400 AC129502.1-201ENST00000623261 1654 ntBASIC8.29□□□□□ -1.08
COL4A5P29400 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.29□□□□□ -1.08
COL4A5P29400 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL4A5P29400 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.28□□□□□ -1.08
COL4A5P29400 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
COL4A5P29400 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
COL4A5P29400 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
COL4A5P29400 OR51A10P-201ENST00000307165 937 ntBASIC8.28□□□□□ -1.08
COL4A5P29400 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
COL4A5P29400 AC003045.1-201ENST00000398779 713 ntBASIC8.28□□□□□ -1.08
COL4A5P29400 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.28□□□□□ -1.08
COL4A5P29400 AL354794.2-201ENST00000424795 1248 ntBASIC8.28□□□□□ -1.08
COL4A5P29400 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.28□□□□□ -1.08
COL4A5P29400 AL020997.1-201ENST00000446554 349 ntBASIC8.28□□□□□ -1.08
COL4A5P29400 UBBP5-201ENST00000446970 266 ntBASIC8.28□□□□□ -1.08
COL4A5P29400 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.28□□□□□ -1.08
COL4A5P29400 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.28□□□□□ -1.08
COL4A5P29400 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC8.28□□□□□ -1.08
COL4A5P29400 AC020914.7-201ENST00000594477 545 ntBASIC8.28□□□□□ -1.08
COL4A5P29400 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.28□□□□□ -1.08
COL4A5P29400 AL512356.3-201ENST00000623005 461 ntBASIC8.28□□□□□ -1.08
COL4A5P29400 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
COL4A5P29400 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC8.28□□□□□ -1.08
COL4A5P29400 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.28□□□□□ -1.08
COL4A5P29400 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 BRD7P1-201ENST00000557705 1915 ntBASIC8.28□□□□□ -1.08
COL4A5P29400 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
COL4A5P29400 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL4A5P29400 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.27□□□□□ -1.08
COL4A5P29400 RNA5SP321-201ENST00000362722 111 ntBASIC8.27□□□□□ -1.08
COL4A5P29400 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
COL4A5P29400 AC099782.1-201ENST00000425889 474 ntBASIC8.27□□□□□ -1.08
COL4A5P29400 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.27□□□□□ -1.08
COL4A5P29400 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.27□□□□□ -1.08
COL4A5P29400 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.27□□□□□ -1.08
COL4A5P29400 AC124916.2-201ENST00000604416 224 ntBASIC8.27□□□□□ -1.08
COL4A5P29400 AC004908.1-201ENST00000606572 541 ntBASIC8.27□□□□□ -1.08
COL4A5P29400 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
COL4A5P29400 AC114546.4-201ENST00000624413 369 ntBASIC8.27□□□□□ -1.08
COL4A5P29400 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.27□□□□□ -1.08
COL4A5P29400 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.27□□□□□ -1.09
COL4A5P29400 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.27□□□□□ -1.09
COL4A5P29400 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.27□□□□□ -1.09
COL4A5P29400 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC8.27□□□□□ -1.09
COL4A5P29400 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.27□□□□□ -1.09
COL4A5P29400 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
COL4A5P29400 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
COL4A5P29400 PSMC1P6-201ENST00000477233 1319 ntBASIC8.27□□□□□ -1.09
COL4A5P29400 PSMC1P4-201ENST00000515236 1327 ntBASIC8.27□□□□□ -1.09
COL4A5P29400 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.27□□□□□ -1.09
COL4A5P29400 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
COL4A5P29400 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 RN7SKP237-201ENST00000364663 301 ntBASIC8.27□□□□□ -1.09
COL4A5P29400 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.27□□□□□ -1.09
COL4A5P29400 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.27□□□□□ -1.09
COL4A5P29400 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.27□□□□□ -1.09
COL4A5P29400 PRDX1P1-201ENST00000449329 596 ntBASIC8.27□□□□□ -1.09
COL4A5P29400 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.27□□□□□ -1.09
COL4A5P29400 AC091849.1-201ENST00000509920 121 ntBASIC8.27□□□□□ -1.09
COL4A5P29400 SNX18P23-201ENST00000510867 677 ntBASIC8.27□□□□□ -1.09
COL4A5P29400 AC027801.3-201ENST00000515049 698 ntBASIC8.27□□□□□ -1.09
COL4A5P29400 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.27□□□□□ -1.09
COL4A5P29400 AC133552.4-201ENST00000576103 676 ntBASIC8.27□□□□□ -1.09
COL4A5P29400 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
COL4A5P29400 APOC2-205ENST00000592257 444 ntTSL 3 BASIC8.27□□□□□ -1.09
COL4A5P29400 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.27□□□□□ -1.09
COL4A5P29400 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC8.27□□□□□ -1.09
COL4A5P29400 AC025162.2-201ENST00000619602 560 ntBASIC8.27□□□□□ -1.09
COL4A5P29400 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
COL4A5P29400 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL4A5P29400 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms