Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.58□□□□□ -1.2
APOEP02649 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
APOEP02649 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
APOEP02649 AC006116.1-201ENST00000587908 2171 ntBASIC7.58□□□□□ -1.2
APOEP02649 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.58□□□□□ -1.2
APOEP02649 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.58□□□□□ -1.2
APOEP02649 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
APOEP02649 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.58□□□□□ -1.2
APOEP02649 AC022306.1-201ENST00000560489 1562 ntBASIC7.58□□□□□ -1.2
APOEP02649 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.57□□□□□ -1.2
APOEP02649 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 AC008171.1-201ENST00000395058 200 ntBASIC7.57□□□□□ -1.2
APOEP02649 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.57□□□□□ -1.2
APOEP02649 AC093799.1-201ENST00000452411 499 ntBASIC7.57□□□□□ -1.2
APOEP02649 SNORA35.1-201ENST00000458908 128 ntBASIC7.57□□□□□ -1.2
APOEP02649 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.57□□□□□ -1.2
APOEP02649 HNRNPA1P17-201ENST00000496620 924 ntBASIC7.57□□□□□ -1.2
APOEP02649 IGLV1-62-201ENST00000518003 441 ntBASIC7.57□□□□□ -1.2
APOEP02649 RPL10P18-201ENST00000519384 309 ntBASIC7.57□□□□□ -1.2
APOEP02649 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 AC233290.1-201ENST00000553021 1186 ntBASIC7.57□□□□□ -1.2
APOEP02649 AC005070.1-201ENST00000603744 365 ntBASIC7.57□□□□□ -1.2
APOEP02649 AC078909.2-201ENST00000620584 398 ntBASIC7.57□□□□□ -1.2
APOEP02649 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.57□□□□□ -1.2
APOEP02649 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 CASC19-212ENST00000641153 1287 ntBASIC7.57□□□□□ -1.2
APOEP02649 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.57□□□□□ -1.2
APOEP02649 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.57□□□□□ -1.2
APOEP02649 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
APOEP02649 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.57□□□□□ -1.2
APOEP02649 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.57□□□□□ -1.2
APOEP02649 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.57□□□□□ -1.2
APOEP02649 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
APOEP02649 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.56□□□□□ -1.2
APOEP02649 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
APOEP02649 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
APOEP02649 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
APOEP02649 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.56□□□□□ -1.2
APOEP02649 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 SNORA70.8-201ENST00000384231 136 ntBASIC7.56□□□□□ -1.2
APOEP02649 AC090114.1-201ENST00000393266 448 ntBASIC7.56□□□□□ -1.2
APOEP02649 SLC25A5P7-201ENST00000406156 896 ntBASIC7.56□□□□□ -1.2
APOEP02649 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.56□□□□□ -1.2
APOEP02649 GEMIN2P2-201ENST00000418195 715 ntBASIC7.56□□□□□ -1.2
APOEP02649 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.56□□□□□ -1.2
APOEP02649 AL161626.1-201ENST00000441480 490 ntBASIC7.56□□□□□ -1.2
APOEP02649 RPL23P10-201ENST00000468780 412 ntBASIC7.56□□□□□ -1.2
APOEP02649 AC139272.1-201ENST00000505516 640 ntBASIC7.56□□□□□ -1.2
APOEP02649 CHCHD2P7-201ENST00000508008 452 ntBASIC7.56□□□□□ -1.2
APOEP02649 AC008417.1-201ENST00000510014 565 ntBASIC7.56□□□□□ -1.2
APOEP02649 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
APOEP02649 IGLVI-42-201ENST00000522485 381 ntBASIC7.56□□□□□ -1.2
APOEP02649 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.56□□□□□ -1.2
APOEP02649 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.56□□□□□ -1.2
APOEP02649 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.56□□□□□ -1.2
APOEP02649 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.56□□□□□ -1.2
APOEP02649 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
APOEP02649 MIR1273F-201ENST00000580581 99 ntBASIC7.56□□□□□ -1.2
APOEP02649 AC024451.4-201ENST00000602578 752 ntBASIC7.56□□□□□ -1.2
APOEP02649 AL031429.2-201ENST00000602605 649 ntBASIC7.56□□□□□ -1.2
APOEP02649 AC012640.3-201ENST00000607847 430 ntBASIC7.56□□□□□ -1.2
APOEP02649 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC7.56□□□□□ -1.2
APOEP02649 AC211433.3-201ENST00000623770 375 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms