Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CABYRP1-201ENST00000465493 1045 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 RN7SL414P-201ENST00000469545 294 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC093325.1-201ENST00000508378 326 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 HPRT1P1-201ENST00000509498 657 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 OR4C9P-201ENST00000532368 925 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 ACTR3BP3-201ENST00000565577 979 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 NPM1P45-201ENST00000583151 559 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 PRELID3BP3-201ENST00000584963 545 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 EIF1P5-201ENST00000585002 234 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC008385.1-201ENST00000604421 355 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 AL109936.2-201ENST00000605350 650 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC072039.2-201ENST00000608883 439 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC016769.4-201ENST00000616893 535 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 FAM74A4-203ENST00000621724 1862 ntTSL 2 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AL356121.2-201ENST00000624715 780 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 MIR1322-201ENST00000638013 71 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 RPS4XP5-202ENST00000449995 1334 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 RNU4-68P-201ENST00000364314 141 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 RN7SKP26-201ENST00000410247 293 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 USP9YP20-201ENST00000419224 558 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 RPSAP1-201ENST00000421328 880 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AL354794.2-201ENST00000424795 1248 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 FECHP1-201ENST00000431896 1214 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC129850.1-201ENST00000436203 508 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC013403.1-201ENST00000436954 263 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 USP9YP29-201ENST00000445112 563 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC104978.1-201ENST00000449387 391 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 OSTCP1-201ENST00000455507 450 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 RPS7P11-201ENST00000484240 586 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC074386.1-206ENST00000487102 761 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 RN7SL612P-201ENST00000497704 295 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 OR5H5P-201ENST00000503164 928 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC010424.1-201ENST00000506336 297 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC006070.1-201ENST00000508151 193 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 LINC01085-203ENST00000511195 326 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC109471.1-201ENST00000511631 612 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 OR4A43P-201ENST00000532938 908 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC090115.2-201ENST00000548060 883 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 COX6CP11-201ENST00000555293 229 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC136619.2-201ENST00000563361 631 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC073387.2-201ENST00000604797 784 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC084036.1-201ENST00000609190 508 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC091059.2-201ENST00000623355 614 ntBASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 METTL8-218ENST00000638989 876 ntTSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 METTL8-219ENST00000640734 726 ntTSL 2 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms