Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 RPL24P7-201ENST00000399435 453 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 OR7E91P-201ENST00000400027 866 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 SNORA3.1-201ENST00000408166 111 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC231533.2-201ENST00000419045 978 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC013429.1-201ENST00000456604 422 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 RPL7P17-201ENST00000470927 724 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC040975.1-201ENST00000472104 316 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SL58P-201ENST00000473445 294 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC106774.2-201ENST00000510266 406 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 EIF3KP1-201ENST00000513279 656 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 BMS1P15-201ENST00000554269 1141 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC007262.1-201ENST00000604099 321 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 MIR7162-201ENST00000611134 69 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC106795.5-201ENST00000623288 454 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 DDX10P2-201ENST00000417796 2614 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC091544.5-201ENST00000620192 3815 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 EEF1A1P26-201ENST00000458319 1363 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 EEF1A1P22-201ENST00000559385 1380 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 RNA5SP301-201ENST00000362537 121 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 SNORA73B-201ENST00000363217 204 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 RNA5SP260-201ENST00000363849 111 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 RNA5SP238-201ENST00000365464 120 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL773545.3-201ENST00000414297 706 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC009299.1-201ENST00000429684 717 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 HIST1H2APS6-201ENST00000448609 364 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SL251P-201ENST00000464175 297 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SL815P-201ENST00000470970 290 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SL516P-201ENST00000496127 297 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 MTND6P8-201ENST00000503471 522 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 COX6CP11-201ENST00000555293 229 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC044860.3-201ENST00000559957 368 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 BMS1P8-201ENST00000565049 1178 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC080112.3-201ENST00000612552 880 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC143336.1-201ENST00000614164 836 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AC022743.1-201ENST00000624990 664 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL355480.4-201ENST00000626823 69 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms